Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Pseudomonas sp. RS175

Subject, 301 a.a., branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  264 bits (674), Expect = 2e-75
 Identities = 144/303 (47%), Positives = 201/303 (66%), Gaps = 7/303 (2%)

Query: 7   FFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGID 66
           F QQL NGL +G  YALIA+GYTMVYG++ +INFAHG+++ IG+Y+ F   A L + G  
Sbjct: 4   FLQQLTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTVFAALGLSGHV 63

Query: 67  S--LPLLMTAAFVASIIVTSAYGYSIERVAYRPLRSSNRLIPLISAIGMSIFLQNTVLLS 124
           S  + +L+    V  ++  +  GY +ERVAYRPLRSS+RL  ++SA+G SIF QN V+L 
Sbjct: 64  SGAVAVLLVTTMVMGLV--ALIGYLLERVAYRPLRSSSRLSAVVSALGASIFFQNAVMLI 121

Query: 125 QDSKDKSIPNLIPGSFSFGPGGAEEVLVSYMQILVFVVTLVAMLGLTLFISRSRLGRACR 184
             +K +  PN I  + +    G +  LV   +I++F  ++  ML L  FI R+R G A R
Sbjct: 122 YGAKFQVYPNDIRPTMAVSFFGMDIPLV---RIMMFGASVALMLLLHFFIHRTRTGTAIR 178

Query: 185 ACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTA 244
           A A D   A L+GI+ N +IAL F+IG AL   A V++ + YG I+   G++ GLKAFTA
Sbjct: 179 AVAIDQGAAKLMGIDVNRVIALVFMIGPALGGAAGVMVGLYYGQIDFTMGWVYGLKAFTA 238

Query: 245 AVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEV 304
           A+LGGIG+IPGAM+GGL+LGV EA GA      +KD +AF +L+L+L+ RPTG+LG    
Sbjct: 239 AILGGIGNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLLGERVA 298

Query: 305 EKV 307
           +K+
Sbjct: 299 DKI 301