Pairwise Alignments

Query, 639 a.a., ATP-dependent zinc metalloprotease FtsH from Pseudomonas sp. RS175

Subject, 655 a.a., ATP-dependent metalloprotease FtsH (RefSeq) from Shewanella loihica PV-4

 Score =  834 bits (2154), Expect = 0.0
 Identities = 442/649 (68%), Positives = 512/649 (78%), Gaps = 16/649 (2%)

Query: 1   MNDMAKNLILWLIIAAVLVTVMNNFS-SPNEPQTLNYSDFIQQVKDGKVERVAV--DGYV 57
           M+DMAKNLILW++IA VL++V   +S S +    ++YS F+  V+ G++  V V  D   
Sbjct: 1   MSDMAKNLILWVVIAVVLMSVFQGYSPSSSNSMKMDYSTFLDDVRSGQINTVEVKSDQRT 60

Query: 58  ITGKRTDGDSFKTIRPAIQDNGLIGDLVDNHVVVEGKQPEQQSIWTQLLVASFPILVIIA 117
           I G +  G+ F TI P + D  LI DL    V ++G++ E+    TQ+ ++ FP+L++I 
Sbjct: 61  IEGTKRTGEKFTTIMP-MYDQDLINDLDRKGVTMKGQEAEESGFLTQIFISWFPMLLLIG 119

Query: 118 VFMFFMRQMQGGAGGKGGPMSFGKSKARLLSEDQVKTTLADVAGCDEAKEEVGELVEFLR 177
           V++FFMRQMQGG GGKG  MSFGKSKA+L+SEDQ+KTT  DVAGCDEAKE+V ELV++L+
Sbjct: 120 VWIFFMRQMQGG-GGKGA-MSFGKSKAKLMSEDQIKTTFGDVAGCDEAKEDVKELVDYLK 177

Query: 178 DPGKFQRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASR 237
           +P KFQ+LGGRIP GVL+VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASR
Sbjct: 178 EPTKFQKLGGRIPTGVLLVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASR 237

Query: 238 VRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFEMNDGII 297
           VRDMFEQAKK APCIIFIDEIDAVGR RGAG+GGGHDEREQTLNQ+LVEMDGFE N+GII
Sbjct: 238 VRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGII 297

Query: 298 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGREQILKVHMRKVPMGDDVAPAVIARG 357
           VIAATNRPDVLD ALLRPGRFDRQVVVGLPD+RGREQILKVHMRKVP+ DDV  +VIARG
Sbjct: 298 VIAATNRPDVLDAALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLADDVKASVIARG 357

Query: 358 TPGFSGADLANLVNEASLFAARSGKRVVEMKEFELAKDKIMMGAERKTMVMSEKEKRNTA 417
           TPGFSGADLANLVNEA+LFAAR  +RVV M+EFE AKDKIMMGAER+TMVMSE+EK  TA
Sbjct: 358 TPGFSGADLANLVNEAALFAARGNRRVVGMEEFESAKDKIMMGAERRTMVMSEEEKEMTA 417

Query: 418 YHEAGHAIVGRVVPEHDPVYKVSIIPRGRALGVTMFLPEEDRYSLSKRALISQICSLYGG 477
           YHEAGHAIVG +VPEHDPV+KV+IIPRGRALGVT FLPE D  S S+R L SQI   YGG
Sbjct: 418 YHEAGHAIVGCLVPEHDPVHKVTIIPRGRALGVTFFLPEADAISQSRRKLESQISVAYGG 477

Query: 478 RIAEEMTLGFDGVTTGASNDIMRASQIARNMVTKWGLSEKLGPLMYAEEEGEVFLGRG-G 536
           RIAEE+  G + V+TGAS DI  A+ IARNMVT+WG S+KLGP++YAE+EGEVFLGR   
Sbjct: 478 RIAEELIYGSERVSTGASQDIKYATTIARNMVTQWGFSDKLGPVLYAEDEGEVFLGRSMA 537

Query: 537 TGQHASFSGDTAKLIDSEVRSIIDQCYGTAKQILTDNRDKLDAMADALMKYETIDAEQID 596
             QH   S +TA +ID EV+ +ID  YG A Q LTDN D L AM DALMKYETIDA QID
Sbjct: 538 KAQH--MSDETASIIDLEVKQLIDNNYGRAHQFLTDNMDILHAMKDALMKYETIDATQID 595

Query: 597 DIMAGRPPREPRDW------SGGTGTPGTPPAVQGERP-ETPIGGPAAD 638
           D+MA R  R P DW      S G G  G   AV    P E P   PA++
Sbjct: 596 DLMARREVRAPADWNMDENGSNGKGNGGRGEAVTSPEPSEAPAAEPASE 644