Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. DMC3

Subject, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  350 bits (897), Expect = e-101
 Identities = 198/525 (37%), Positives = 311/525 (59%), Gaps = 12/525 (2%)

Query: 1   MRNNQPITQRERTFPAQQRLISTTDAKGVITYCNDDFVEISGFSREELIRAPHNLVRHPD 60
           MRNNQP+TQ+E T+P    L+STT     I Y + +F +++G++ +EL+  PHN+VRHPD
Sbjct: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60

Query: 61  VPSAVFSHMWGTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPVFDGNQVIGYESVRVKPTA 120
           +P   F  MW  LK G  WMG+VKNRCK+GDHYWV+A+ +P+ +  +V+ Y+SVR+ P+ 
Sbjct: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120

Query: 121 EQIRRAEALYQRINQGKSA----IPSTDKWLPLLQDWLPFILVSQLSFMIGATLNSQWGF 176
           + +  A+ LY+ I  GK+     +P T  W  L    L FI+ + +SF          G 
Sbjct: 121 QHVDNADKLYKEIKAGKTPWQLKMPRTRLWQRL---GLGFIVAAGVSFAADRFFAGA-GL 176

Query: 177 ALAAALSVPLGLMGLQWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQE 236
            L   L++   LM  Q+ +R L+ L + A +   +PL+  +Y       + +++++  ++
Sbjct: 177 PLMLVLTI---LMAYQFTRR-LETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQ 232

Query: 237 ARLKTCLTRLQDTAEHLTDQAKQSDALAHNSSTGLERQRVETEQVATAVNQMAATTQEVA 296
           + L   + R+QD++  + + AK S   +  ++  L+ Q  ETEQ+ATA+ QM  T  E+A
Sbjct: 233 SELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIA 292

Query: 297 SHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVVVGETGLTVTQLAKDSDEIGGVVD 356
            + Q  +DAT  A      G     +T +AI  ++  +      + QL+  S  IG V++
Sbjct: 293 HNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVME 352

Query: 357 VIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQ 416
           VI+ IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LAQR++EST +I  +I  +Q 
Sbjct: 353 VIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQT 412

Query: 417 TASSAVQTMEAGHRQAEEGVARVLEADQALVGISEAVANITDMTTQIAAATEEQSAVAEE 476
           +  +AV+T+E G++ +   V     +   L  +   V++IT    QIA A EE + V E+
Sbjct: 413 STRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTED 472

Query: 477 ISRNISNISELADQTSEQAHNSALLSEELTKTANTQYSLVARFNR 521
           ++R++ +IS+++ +T   A N+     +L      Q SLVA+F R
Sbjct: 473 MNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRR 517