Pairwise Alignments

Query, 636 a.a., Acetoin catabolism regulatory protein from Pseudomonas sp. DMC3

Subject, 634 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  347 bits (890), Expect = e-100
 Identities = 249/642 (38%), Positives = 345/642 (53%), Gaps = 40/642 (6%)

Query: 5   HLSRHARQVLTVTQGKPHLHGPGAD----PSIARSWLRCLED-YHLDPSVTMAPTVLEHG 59
           H +R AR+ L       HL G   +      I  SW R L    H +    +A   LE  
Sbjct: 13  HEARLAREKL-------HLEGEVPNGVLRAEIDASWRRSLSHGVHFNGKHELA---LESS 62

Query: 60  RVLESRERLQQVLQIAGTEMSSLHQQLSGAGHAVLLTDARGVILNCVTAPAERKIFERAG 119
             LE      ++L  A         +  G    ++L ++   IL  V   A+R   + +G
Sbjct: 63  ASLEVLLASNRLLIDAAMPAIDYLAERQGKEGLIILANSEATIL-AVEGRADR--LKGSG 119

Query: 120 LW---LGADWSEACEGTNGIGTCLVERQALTIHQDEHFRGRHTGLTCSASPVFDPHGELL 176
           L    LGA WSEA  GTN +GT LVE +   I   EH+  R +  +CS+ P+  P G++L
Sbjct: 120 LQDITLGACWSEAARGTNALGTALVEARPTLIDCGEHYLDRLSDFSCSSVPIHCPQGDIL 179

Query: 177 AVLDVSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSE 236
            VLD++   P + R     + AL+ ++   IES  F   F  Q +L FH + + +    +
Sbjct: 180 GVLDLTREGP-LGRAHD--STALLAMAVSQIESRVFNASFPEQIVLAFHSRRQYLESPWQ 236

Query: 237 GLLAFDGEGRISAVNQSALNLLGHIRGGLLGKPVEAFFDCSLDDLLGRASANASASWPLR 296
           GLLA    G+I AV+  A  LL   R  L+G   E F       LL R       S  L+
Sbjct: 237 GLLAVSLGGQILAVSTQACQLLNAERSALVGHRCEEFLGVDGLQLLARLQQGGIGS--LQ 294

Query: 297 TRDGRHLFAVLRGESRKPTAI-VPAPIAA-PAPRLSGICLGDEALQAEFRKALRVFER-- 352
           T  G   +  LR   R       P  +A  P P+L    L      A + +ALR+  +  
Sbjct: 295 TAKGEFFYKTLRAPQRSINVTSTPRSVAKNPKPQLDLESLAGS--NARYARALRMARQGL 352

Query: 353 --DVPLLINGETGSGKEAFAKAVHQASQRSGNAFVALNCAAIPESLIESELFGYRGGSFT 410
             ++P+L+ GETG+GKE  A+A+H A  R    FVA+NCAAIPE LIESELFGYR G+FT
Sbjct: 353 ANELPVLLLGETGTGKEVIARALHMAGSRCDKPFVAVNCAAIPEGLIESELFGYREGAFT 412

Query: 411 GARKDGMRGKLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIG-GEPQAVDVRII 469
           G+R+ GM G+LQQA GGTLFLDEIGDMPLALQ RLLRVL+DR+V P+G GE Q +DV +I
Sbjct: 413 GSRRGGMIGRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALI 472

Query: 470 SATHRNLLERVEDGSFREDLYYRLNGLEVALPALRERSDKSQLLDFLLAEEAGGETILID 529
            ATHR+L   VE+  FREDL+YR+NG+ V LPALRER D S+L+  LL ++    T+ + 
Sbjct: 473 CATHRDLKRLVEEKHFREDLFYRVNGISVMLPALRERDDFSELVTRLL-DKLDAPTVKLK 531

Query: 530 EPARQALLAFNWPGNVRQLRNVLRTLAALCDGGR--VGVEDLPVMIRQARPAVVAAQIVA 587
                 L  ++WPGN+RQL  VLRT  A+ + G   + +E LP  +     A    +   
Sbjct: 532 GELSNLLAGYHWPGNIRQLEMVLRTALAMREPGETVLSLEHLPDSMLDELNA--CERSTC 589

Query: 588 QPLDDAERVALLNALEQTRWHMTHTAEQLGVSRNTLYRKLRK 629
             + + E   +  +L+    +++ TA+ LG+SR TLYRKL++
Sbjct: 590 GSIRENELELIRQSLDNHHGNVSATADALGISRATLYRKLKQ 631