Pairwise Alignments

Query, 377 a.a., Cellobiose 2-epimerase from Pseudomonas sp. DMC3

Subject, 419 a.a., D-mannose isomerase (EC 5.3.1.7) (from data) from Pseudomonas fluorescens FW300-N2E3

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 92/349 (26%), Positives = 139/349 (39%), Gaps = 56/349 (16%)

Query: 52  HQPLPAQ-RYRAMACARQLYLFSS--LIGVVDNAEVRAAALFRSLQRHFHDAEHGGWFYS 108
           H  LPA  +   M  AR  + F+   + G+   AE+    +  +L     DAE GGWF +
Sbjct: 47  HGQLPADAQAHTMNTARMTHSFAMAHIQGLPGFAELVDHGI-NALNGLLRDAEFGGWFAA 105

Query: 109 IDAQGKPLDQRKDLYTHAFILFACAHYWDKSRDSLAESTLNAALEIIGRRF-ATGDGLYE 167
            D +    D  K  Y HAF+  A +      R   AE+ LN A+ II + F +  +G   
Sbjct: 106 PDHRDG--DTGKAAYLHAFVALAASSAVIAQRPG-AEALLNDAIAIIEQHFWSEEEGAMR 162

Query: 168 ACLERDWLTLQTGPLQNPLMHLAEAFLATLAVREDPQ-TQKALLELCTAMHKQFVDPQYC 226
               RDW   +     N  MH  EAFLA   V +D +   +AL  +   +H+      + 
Sbjct: 163 ESFNRDWSEEEPYRGANSNMHATEAFLALADVTQDSRWLNRALRIVERVIHRHAASNDHL 222

Query: 227 VLME-----KPL------GAVDNW----YEPGHQFEWYFLL-------ESSALLRDSKLY 264
           V+       +PL         D++      PGH FEW  LL         + +L    L 
Sbjct: 223 VVEHFDRDWQPLRDYNQANPADHFRPYGTTPGHGFEWSRLLLHLEAARGQAGMLTPGWLL 282

Query: 265 RALDRAFAFTEQYGVLESCGAVRAMLDLDGNGRP--RDSTQRIWAQAEYLRALTLRADSE 322
               + FA    +G  +  GA   +  LD + RP  R     +  +A    ++ L+   E
Sbjct: 283 SDAQQLFANNCLHG-WDVDGAPGIVYTLDWDNRPVVRQRLHWVHCEASAAASVLLKRTGE 341

Query: 323 AVVLRQLQALQQRF-----------LHAGGWHECRDENGEVSRKDMPST 360
           A    Q +   +RF           +H G WH       E+  ++ PST
Sbjct: 342 A----QYETWYRRFWEFSDRCLIDRIH-GSWHH------ELDPQNRPST 379