Pairwise Alignments

Query, 254 a.a., HTH-type transcriptional repressor NanR from Pseudomonas sp. DMC3

Subject, 234 a.a., Transcriptional Regulator, GntR family (NCBI) from Rhodospirillum rubrum S1H

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 2/214 (0%)

Query: 5   PLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLMPGDRLVERDLCDRLGVSRTSVREALRH 64
           PL D+   +       E +   +   I+   + PGD L E  L +  GVSRT VREAL+H
Sbjct: 12  PLTDAALADEGAAKAAERIYGAIVDKILAGTIKPGDSLNELALAEAFGVSRTPVREALQH 71

Query: 65  LESEGLVEFADAKGPRVAIITLDDAVDIYELRCVLEGLIVQLFTLRAKAKDIKALEKALD 124
           L   GL E    +   V  + L +  D++E    +E L  Q    R  A + ++LE  + 
Sbjct: 72  LSIAGLAERGARRAFMVRRLDLAELGDLFETMGEIEALCAQYSARRMTAMERRSLESTVA 131

Query: 125 DNRKALKDGELQQVIDSVQG-FYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQENRR 183
           +    +K G+ Q     + G F+  L +G+ N       R ++ R +  R     Q +R 
Sbjct: 132 EGADMVKRGD-QAAYTRLNGRFHQALFDGAHNDSLRDIARLVRVRTAPYREAQFRQTDRL 190

Query: 184 GASNHEMEKMVEAIKSGDPLAAHQACVDHVRAAA 217
            +S  E EK++ AI S +   A  A   HV A A
Sbjct: 191 ASSQGEHEKILAAILSENAQEALSAMRTHVAATA 224