Pairwise Alignments

Query, 286 a.a., Flagellin from Pseudomonas sp. DMC3

Subject, 297 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  187 bits (474), Expect = 3e-52
 Identities = 117/295 (39%), Positives = 168/295 (56%), Gaps = 10/295 (3%)

Query: 1   MALTVNTNTTSLNVQKNLNRASDALSTSMQRLSSGLKINSAKDDAAGLQISNRMSSQIRG 60
           M+L +N N  ++N   NL+ +   LSTS++RLSSGL++ +A DDAAGL I   M S I  
Sbjct: 1   MSLVINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISA 60

Query: 61  NTQAIQNANDGISVAQTAEGALQASTDILQRMRELAVKARNGTNGTADQTATNAEFAQMS 120
             Q ++NAND IS+ QTA+GAL    + L RM+ELA +A  GT  +  +   ++E+  M+
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DEITRISAATNLNGKNLLDGSAGTVTLQVGA--NTGSAN-HIDLVLSSKFDAVSLSVGSG 177
            EITRI+ AT+ NG +LL+G+  + T       +TG    H      S  D   + +G+ 
Sbjct: 121 SEITRIANATDFNGLHLLNGNLSSDTHDGSGLQSTGKMKIHFGTANDSAEDYYYVQIGTS 180

Query: 178 TVVLTGTSGTG-AGSASQNI------DNAITAIDAAIAAIGATRASLGASQNRLTSTISN 230
           T    G      AGSA   I        A+ AI  AI +    RASLGA QNRL +TISN
Sbjct: 181 TASALGVGNQATAGSAGYTISTQSAAQQALVAIQNAIISKDNIRASLGALQNRLENTISN 240

Query: 231 LQNITENTTAAQGRVQDTDFAAETANLTKQQTLQQASTSVLAQANQLPSAVLKLL 285
           L+   EN  +A+ R+ D D ++E     +QQ L Q++ ++L+QAN LP   ++LL
Sbjct: 241 LRTQAENLQSAESRISDVDVSSEMTEFVRQQILTQSAVAMLSQANSLPRMAMQLL 295