Pairwise Alignments

Query, 380 a.a., Spermidine/putrescine import ATP-binding protein PotA from Pseudomonas sp. DMC3

Subject, 381 a.a., putrescine ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  374 bits (960), Expect = e-108
 Identities = 200/386 (51%), Positives = 262/386 (67%), Gaps = 14/386 (3%)

Query: 1   MANASSTYRKALEGQQQPKKVLVKVDRVTKKFDETVAVDDVSLEIHQGEIFALLGGSGSG 60
           M +  S  R          K  + V  VTKKF +  AVDD+SL I+  E FALLG SG G
Sbjct: 2   MKSLGSIRRSFAPWADPASKPFISVKNVTKKFGDFTAVDDLSLNIYTREFFALLGASGCG 61

Query: 61  KSTLLRMLAGFERPTEGRILLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLK 120
           KSTLLRMLAGFE+PT G I+LDG  +  +PPY RP+NMMFQSYALFPHMTV  N+AFGLK
Sbjct: 62  KSTLLRMLAGFEQPTSGEIILDGQSLAGIPPYRRPVNMMFQSYALFPHMTVENNVAFGLK 121

Query: 121 QDRLPASEIDARVEEMLRLVHMTQYAKRRPHQLSGGQRQRVALARSLAKRPKLLLLDEPM 180
           QD +P ++I  RV +ML+LV + ++AKR+PHQLSGGQRQRVALARSLAKRPK+LLLDEP+
Sbjct: 122 QDGMPKADIAERVAQMLKLVKLEKFAKRKPHQLSGGQRQRVALARSLAKRPKVLLLDEPL 181

Query: 181 GALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDI 240
           GALDKKLR + Q EL+++ + +G+T V+VTHDQEEAMTMA RIA+M  G + Q+ +P +I
Sbjct: 182 GALDKKLREETQFELMDLQQELGLTFVVVTHDQEEAMTMADRIAVMSHGKVVQVATPAEI 241

Query: 241 YEAPVSRMVCEFIGNVNAFDGTVVEDLEGHAIIHSPD-----LQQKIYVGHGVSTSVQDK 295
           YEAP SR V +FIG+VN FDG V    +G+  + +       +      G+G   +V   
Sbjct: 242 YEAPNSRFVADFIGDVNIFDGKVTSAEDGYIRVETTGGIPVRMASPEKPGNGAKAAV--- 298

Query: 296 SITYAIRPEKMLVSTTQPEFR-YNWSEGKVHDIAYLGGHSVFYVELPGGKIVQSFMANAE 354
               AIRPEK+ +    P     N +EG++ DI YLG  +VF++ L  GK+V++   NA 
Sbjct: 299 ----AIRPEKIRIGRQPPAHAPVNAAEGEIWDIGYLGDMTVFHIRLKDGKVVKASSLNAV 354

Query: 355 RRGARPT-WDDKVYVWWEDDSGVVLR 379
           R    P  +D +V++ + DD+GVVL+
Sbjct: 355 RAVEDPLGYDQQVWISFGDDAGVVLK 380