Pairwise Alignments

Query, 629 a.a., Acetoin catabolism regulatory protein from Pseudomonas sp. DMC3

Subject, 617 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas sp. BP01

 Score =  412 bits (1059), Expect = e-119
 Identities = 251/631 (39%), Positives = 358/631 (56%), Gaps = 21/631 (3%)

Query: 1   MKPASINAHARQVLQAVQGSVASHSAAADLAITRSWRRCLDQYQLDPASRRAPDVLEQAR 60
           M  A+  AH   V + ++ +     A     I  SWRR ++ Y+LDP S++ P +L Q+ 
Sbjct: 1   MLAANSRAHVDCVSRVLKNADRLPQAPVPALILDSWRRSMELYRLDPGSQQGPRILSQSL 60

Query: 61  LREHRAPLEHIISVAHWQMNSLHQQLGRDGHVVLLTDARGVAIDSVFNEAERGEFQRSGL 120
           L E R   E  + +A   +  LH+++    + VLLTDA+G  ID     A R + +++GL
Sbjct: 61  LNECRERAELFLRIASDAVARLHERVRGADYCVLLTDAQGRTIDYRVESAIRNDCRKAGL 120

Query: 121 WLGSVWSEEHEGTNGVGTCLVERQHVTIRRDEHFRGQHVGLTCSASPIFDASGELLAVLN 180
           +LG+ WSE  EGT GV   L  +  VT+ + +HFR   +GLTC+A+P+FD  GELL V++
Sbjct: 121 YLGTCWSEGEEGTCGVAAVLTSKAPVTVHKRDHFRAAFIGLTCTAAPVFDPQGELLGVVD 180

Query: 181 LSSVREDSSLEQRFKAMALTNLSARLIESCFFLGHDPQRYLLRFHPDAGFVGLLGEGLLS 240
           +S+++       +     L   +AR IE+ FF+      +++R H   G+V    + LL+
Sbjct: 181 VSALQSPDDRRSQHLIRQLVEQTAREIENAFFMHSAQGHWVMRAHGTPGYVESQPDYLLA 240

Query: 241 FDESARICSVNAAALDLLGLSREQMVGQSLTMLLETPMEQLLDQASAQ-AHVCWPMRLAD 299
           +D   R+ ++N+       L+R ++V Q L  L E  + +L D    +  +     RL  
Sbjct: 241 WDADGRLQAINS-------LARRRLV-QHLGRLPEH-IGELFDMGQLRRVNTSSAQRLPG 291

Query: 300 GRLFYGQLREPIRSAPLTLAPVPPIKDERVCLEDSRLQRGFARALRVLERDVPVFLQGET 359
               YG++     SAP     V P+       +D+R+++    A RV + ++ V +QGET
Sbjct: 292 LGGLYGRV-----SAPQQRQRVQPLHQA----QDARIEQHLRLATRVKDCNLAVLVQGET 342

Query: 360 GTGKEAFAAALHRASSRAGQPFVAINCAAIPETLIESELFGYRGGSFTGARKDGMVGKLE 419
           G GKE FA  +H+ S R   PFV +NCAAIPE LIESELFGY  G+FTGA   GM G L+
Sbjct: 343 GVGKEVFARQIHQQSQRRDGPFVTLNCAAIPENLIESELFGYVAGAFTGASSKGMQGLLQ 402

Query: 420 QAHGGILFLDEIGDMPLALQTRLLRVLEERQVVPLGSATPRPLDVRLISASHQNLPACVA 479
           QA GG LFLDEIGDMPL LQTRLLRVL E +V PLG+A    +D+++I A+H++L A V 
Sbjct: 403 QADGGTLFLDEIGDMPLNLQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLVAMVK 462

Query: 480 DGRLREDLFYRIGGFAVELPPLRERSDKGRLLDLLLREE--AAGATVRLQAGVRERLLAQ 537
           DGR REDL++R+     ELPPLRER D+  L+  LL EE  A G  V L     + LL  
Sbjct: 463 DGRFREDLYFRLANARFELPPLREREDRLGLIHQLLAEEAQACGVEVVLADDALQALLVY 522

Query: 538 PWPGNVRQLRTCLRTLVALAVEGRVTLEDVHELLPASDDQPVDDPLGVSERQTLLSMIEA 597
            WPGN+RQLR  LR   A++  G+V L+D+ + +        D  +    RQ LL  +  
Sbjct: 523 RWPGNLRQLRQVLRYACAVSEGGQVQLQDLPQEVRGEAVVSSDSGVSCPARQLLLDALIR 582

Query: 598 EHWHVARVARRLGISRNTLYRKLRQHGITRP 628
             W  A  AR LGISR TLYR++ +H I  P
Sbjct: 583 HRWKPADAARALGISRATLYRRVHEHHIEMP 613