Pairwise Alignments

Query, 629 a.a., Acetoin catabolism regulatory protein from Pseudomonas sp. DMC3

Subject, 625 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas aeruginosa PA14

 Score =  429 bits (1102), Expect = e-124
 Identities = 266/633 (42%), Positives = 360/633 (56%), Gaps = 16/633 (2%)

Query: 1   MKPASINAHARQVLQAVQGSVASHSAAADLAITRSWRRCLDQYQLDPASRRAPDVLEQAR 60
           M  A    H   V + ++ +     A     I  SWRR ++Q++LDP S + P +L Q  
Sbjct: 1   MLSAHSKDHVDCVSRVLRNAARLPQAPVPTPILDSWRRSMEQHRLDPGSLQGPRILSQTL 60

Query: 61  LREHRAPLEHIISVAHWQMNSLHQQLGRDGHVVLLTDARGVAIDSVFNEAERGEFQRSGL 120
           L E R   E  + +A  ++  LH ++    + VLLTDA+G  ID       R + +++GL
Sbjct: 61  LDECRERSELFLRIASEEVARLHGRVRDADYCVLLTDAQGRTIDYRVESTIRNDCRKAGL 120

Query: 121 WLGSVWSEEHEGTNGVGTCLVERQHVTIRRDEHFRGQHVGLTCSASPIFDASGELLAVLN 180
           +LG+ WSE  EGT GV   L +R  VT+ + +HFR   + LTCSA+P+FD  GELL VL+
Sbjct: 121 YLGTCWSEGEEGTCGVAAVLTDRTAVTVHKRDHFRAAFIDLTCSAAPVFDPQGELLGVLD 180

Query: 181 LSSVREDSSLEQRFKAMALTNLSARLIESCFFLGHDPQRYLLRFHPDAGFVGLLGEGLLS 240
           +S+V+       +     +   SAR IE+ FF+      ++LR H   G+V    + L +
Sbjct: 181 VSAVQSPDDRRSQHLIRQMVAQSAREIENAFFMHSAQGHWVLRAHRAPGYVDSQPDYLFA 240

Query: 241 FDESARICSVNAAALDLLGLSREQMVGQSLTMLLETPMEQLLDQASAQAHVCWPMRLADG 300
           +D   R+ ++N AA   L     Q +GQ  + + E      L  A+ QA     +R   G
Sbjct: 241 WDADGRLLALNPAARHYL----RQRLGQVPSHIGEVFDLDALHAAADQAPCL--LRGQAG 294

Query: 301 RLFYGQLREPIRSAPLTLAPVPPIKDERVCLEDSRLQRGFARALRVLERDVPVFLQGETG 360
            L + +L  P   A      VP   D+     D R+      A+RV +R++PV +QGETG
Sbjct: 295 EL-HVRLSAPRAKARRLEREVP---DDAAL--DPRIAESLRLAVRVKDRNLPVLIQGETG 348

Query: 361 TGKEAFAAALHRASSRAGQPFVAINCAAIPETLIESELFGYRGGSFTGARKDGMVGKLEQ 420
            GKE FA  LH+AS+R  +PFVA+NCAAIPE+LIESELFGY GG+FTGA   GM G L+Q
Sbjct: 349 AGKEVFARQLHQASARRDKPFVALNCAAIPESLIESELFGYVGGAFTGAAAKGMRGLLQQ 408

Query: 421 AHGGILFLDEIGDMPLALQTRLLRVLEERQVVPLGSATPRPLDVRLISASHQNLPACVAD 480
           A GG LFLDEIGDMPL LQTRLLRVL E +V PLG+A  + +D+++I A+H++L A VA 
Sbjct: 409 ADGGTLFLDEIGDMPLGLQTRLLRVLAEGEVAPLGAARRQAVDIQVICATHRDLAALVAA 468

Query: 481 GRLREDLFYRIGGFAVELPPLRERSDKGRLLDLLLREEAAGATVRLQAG--VRERLLAQP 538
           G  REDL++R+GG   ELPPLRERSD+  L+  +L EE A   VR++ G    E LL   
Sbjct: 469 GGFREDLYFRLGGARFELPPLRERSDRLALIRRILDEETAHCGVRIELGEAALECLLGYR 528

Query: 539 WPGNVRQLRTCLRTLVALAVEGRVTLEDVHELLPASDDQPVD--DPLGVSERQTLLSMIE 596
           WPGNVRQLR  LR   AL     + L D+   L      P    +  G  ER  LL  + 
Sbjct: 529 WPGNVRQLRHVLRYACALCGGATLQLADLPAELRGEGRTPASACESGGGPERDALLDALV 588

Query: 597 AEHWHVARVARRLGISRNTLYRKLRQHGITRPG 629
              W     AR LGISR TLYR++R+HGI  PG
Sbjct: 589 RHRWKPMAAARELGISRATLYRRVRRHGIRMPG 621