Pairwise Alignments

Query, 310 a.a., IS110 family transposase from Pseudomonas fluorescens SBW25-INTG

Subject, 329 a.a., IS110 family transposase from Dickeya dadantii 3937

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 17/306 (5%)

Query: 4   YPAGIDVSSGSLEI-----RVDQLDVAMSCSNSQSDFPGLIGWLTLHRV----GRVLLEA 54
           Y  GID+S   +++      +       +  N  +    L  WLT  +       +++EA
Sbjct: 2   YYVGIDISKRVVDVCLLADGIKGKRKTKTLPNGPNAVQALAEWLTRQKCEPSQAHIIMEA 61

Query: 55  TGGYERKVMKALQAAGFEVIRINPCRAKSFARAMGQQAKTDPIDARLLAQFAAVIKSPDS 114
           TG Y   +   L  +G  V  INP R + FAR MG   KTD +DA +LA +  + +    
Sbjct: 62  TGVYHEHLAYGLHHSGIAVSVINPHRLREFARGMGILTKTDKVDACVLACYGCLRQPEGW 121

Query: 115 RVTSAEQDDLRALVQQREHFVQQRDDDKRRLK----TTSSDVVKPALQSHIDYLQKVLKE 170
              S E   LRAL+Q R+  +  +   + RL     T +++ V  +L+S + +++  L+ 
Sbjct: 122 TPPSPEIRKLRALLQHRDSLLGDKQRLENRLSTLNATLTTEEVVTSLESMVQHVKGELER 181

Query: 171 LESLIRQSAERLD--RKKVALLCSVKGIGLVTAASLMSYLPELGEVGRHQIAALSGTAPY 228
           +E LI    +R    +  + LL S+ G+G     ++++ +         Q+AA  G  P 
Sbjct: 182 IERLIEGHIDRHPGLKNDLKLLKSIDGVGDQIGWNMLATIRGSNFRSAEQVAAYLGVIPV 241

Query: 229 NDDSGKH-KGKRHISG-GRFAARRSLYMACWSVIRFQPEFAARYKALREKGKCAKVALIA 286
              SG   +G+  +S  G  A R  LYM   + I       A+Y+ L  KGK   +A+ A
Sbjct: 242 ERRSGTSVRGRARLSKIGPPAIRAKLYMGAIAAISHNRHVKAQYERLLLKGKAKMLAIGA 301

Query: 287 CMRVLL 292
            MR L+
Sbjct: 302 AMRKLV 307