Pairwise Alignments

Query, 162 a.a., type VI secretion system tube protein Hcp from Pseudomonas fluorescens SBW25-INTG

Subject, 162 a.a., Hcp1 family type VI secretion system effector from Pseudomonas simiae WCS417

 Score =  221 bits (562), Expect = 6e-63
 Identities = 101/161 (62%), Positives = 126/161 (78%)

Query: 1   MAVDMFLKLGDIKGESRDQAHRDEIDITEWAWGLSQTGSMHSGTGGGAGKADFANLNLTK 60
           MAVD+F+K+GDIKGES D+AH+DEID+  W+WG++Q+G+MH G GGGAGK +  +L+LTK
Sbjct: 1   MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMAQSGNMHVGGGGGAGKVNIQDLSLTK 60

Query: 61  PLDKSSPNLMMACASGKHYPEARLVVRKAGGTSPVEYLVITLKEVMVVSYGTGADSKDDL 120
            +DK+SPNLMM CASGKH  + +L VRKAGG S VEY+VI L+EV+V S  TG    DD 
Sbjct: 61  YVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMVINLEEVLVTSLSTGGSGTDDR 120

Query: 121 LYDRIALNFASVDISYQPQKADGAKDGGPVKFGWNIRQNIK 161
           L + + LNFA V + YQPQKADG KDGG +KFGWNIR N K
Sbjct: 121 LTENVTLNFAQVMVDYQPQKADGTKDGGAIKFGWNIRSNTK 161