Pairwise Alignments

Query, 401 a.a., multidrug effflux MFS transporter from Pseudomonas fluorescens SBW25-INTG

Subject, 396 a.a., MFS family multidrug transport protein, bicyclomycin resistance protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  149 bits (375), Expect = 2e-40
 Identities = 108/389 (27%), Positives = 187/389 (48%), Gaps = 7/389 (1%)

Query: 8   SRSLLFLLVALTALGEVSTQLIIPGLGAIEQALAAPAGSALMALSAFVAAFGLGQLLFGP 67
           S +++F+L  L  L  +S  + +P L  I      PAGSA M LS ++  F LGQL++GP
Sbjct: 8   SFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGFALGQLIYGP 67

Query: 68  LSDRIGRRPVLIGGLALYVLATLSMLLVDDMYQFIAARVLQGLGACAALVLARTVVRDVW 127
           ++D +GR+PV++GG  ++  A ++  L   + Q I  R   GL A AA V+   ++RD++
Sbjct: 68  MADSLGRKPVILGGTLVFAAAAVACALAQTIDQLIVMRFFHGLAAAAASVVINALMRDIY 127

Query: 128 -KAEAGPALALTMIGMLYAIVVAPMVGGLLIKLFGWHAPIILALTIGSVVLLLAVL-FFR 185
            K E    ++  M+    A ++AP+VGG ++    WH  I   L I +++  + +    +
Sbjct: 128 PKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHY-IFWILAIAAILASVMIFALIK 186

Query: 186 ESNHALDPKAGHWRTLGGQYLDLLKGRQYRAFAVALACTYGAMFSVIAGSSTVFINLLGF 245
           E+      +  H RT  G +  L + ++  ++ +A   ++  MFS ++    V+I +   
Sbjct: 187 ETLPVERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHV 246

Query: 246 SSLEYGINFGLIVSMLIVGSTYTRRNIMRLGPQRIVAMGVALVAFGGVLAVVIYALFGLS 305
              ++G  F L +  L V +    R + R+G   +   G+  + F   + +V  AL G+ 
Sbjct: 247 PPQDFGYYFALNIVFLFVMTIINSRFVRRVGALNMFRAGL-WIQFAMAVWMVFSALMGIG 305

Query: 306 AVGLDIPIALATLGGGLVLPGSVTGGVMPNAHRAGLAAGLMGFSQMFGATCSGVLLSHLR 365
              L + +A       +V   ++   +    H AG A+ L G  +       G LLS   
Sbjct: 306 FWALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLSLAT 365

Query: 366 DGSAAPMI-IIQACFAVTAFVAFHLLRER 393
             SA PMI  I  C A +  + F+L   R
Sbjct: 366 FNSAWPMIWSIALCAACS--ILFYLYASR 392