Pairwise Alignments

Query, 727 a.a., DNA helicase II from Pseudomonas fluorescens SBW25

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score =  874 bits (2257), Expect = 0.0
 Identities = 441/725 (60%), Positives = 557/725 (76%), Gaps = 5/725 (0%)

Query: 4   DLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSILSVT 63
           D SLLL+ LND QR+AVAAP+   L+LAGAGSGKTRVLVHRIAWL+ VE ASP S+++VT
Sbjct: 3   DPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVT 62

Query: 64  FTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDDQQR 123
           FTNKAAAEMR RIE+LM  + +GMW GTFHG+ HR+LRAH+ +A L + FQI+DSDDQQR
Sbjct: 63  FTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQR 122

Query: 124 LVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYEAAC 183
           L+KR+I+   LD+++WPARQ  W+IN QKDEGLRP HI A  D    T   +Y AY+ AC
Sbjct: 123 LLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAF-DPVTQTYLKLYTAYQEAC 181

Query: 184 VRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAKGGD 243
            RAG++DF+E+LLRAL+L R N  +  HYQ RF+HILVDEFQDTNA+QYAWLR++A    
Sbjct: 182 DRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQS 241

Query: 244 SLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIANNT 303
           ++M+VGDDDQSIYGWRGA++ENI +++ +FP   TIRLEQNYRST  IL+A+N LIANN+
Sbjct: 242 NVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNS 301

Query: 304 GRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNAQSR 363
            R+GK+LWTDG  GE I++Y+A+NE DEAR+VV  I+   + G   +D AILYR+NAQSR
Sbjct: 302 ERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQSR 361

Query: 364 VLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGIGEK 423
           VLEEALL+  + YRIYGG RFFER EIK+A++YLRL+  R +D A ERVIN P RG+G+K
Sbjct: 362 VLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDK 421

Query: 424 TVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLHLMT 483
           T+E IR  AR    ++W+A   L+ ++ LTGRAA AL  FVELI  L  +  +MPLH++T
Sbjct: 422 TLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVLT 481

Query: 484 QTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHASLE 543
              ++ SGL+  ++ EKGEK +AR+ENLEELV+A R FE  EE +E+T L AFL HA+LE
Sbjct: 482 DHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALE 541

Query: 544 AGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRLAYV 603
           AG+ QADEH+D++QLMTLHSAKGLEFP VF+VG+EEG+FP +MS EE GRLEEERRL YV
Sbjct: 542 AGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYV 601

Query: 604 GITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQQQN 663
           G+TRAMQ L +TYAE RRLYG + Y+K SRF+RE+P+G + EVR+   VSRP   G+   
Sbjct: 602 GMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGR--- 658

Query: 664 SSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNF-AEGSKWLMMGYA 722
            S         ET F+LG +VRH  FGEG I+NFEG+G Q+RVQV F  EG KWL+  YA
Sbjct: 659 FSQTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYA 718

Query: 723 KLEAI 727
           +LE +
Sbjct: 719 RLEKV 723