Pairwise Alignments

Query, 727 a.a., DNA helicase II from Pseudomonas fluorescens SBW25

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  892 bits (2304), Expect = 0.0
 Identities = 444/724 (61%), Positives = 558/724 (77%), Gaps = 6/724 (0%)

Query: 4   DLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSILSVT 63
           D+S +++ LNDAQR+AV A     LVLAGAGSGKTRVLVHRIAWL+ V+   P  IL+VT
Sbjct: 2   DVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAVT 61

Query: 64  FTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDDQQR 123
           FTNKAA EMR+RIEQ+M I   G+W GTFHG+AHRLLR+HW++AGL + FQ+LDSDDQ R
Sbjct: 62  FTNKAAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQLR 121

Query: 124 LVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQAS-GDLFLATMRSIYEAYEAA 182
           L+KRV+RE  +DE +WP +QAQWFI+ QKDEGLR  HIQ + GD FL+ M  IY  YE  
Sbjct: 122 LIKRVMRENQIDESKWPPKQAQWFISSQKDEGLRVDHIQENPGDHFLSIMLKIYRQYEKL 181

Query: 183 CVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAKGG 242
           C + G++DF ELLLR+ +LW   P LLAHYQ RF+HILVDEFQDTN +QYAWL++LA   
Sbjct: 182 CQQGGLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASNR 241

Query: 243 DSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIANN 302
             + VVGDDDQSIYGWRGAK+ENI QY  DFP+A  +RLEQNYRST  ILKAANA+IANN
Sbjct: 242 VPMTVVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIANN 301

Query: 303 TGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNAQS 362
            GRLGKELWTDG EGE I+LYAAFNE DEA Y+ ++I + ++ G  RS+ AILYRSNAQS
Sbjct: 302 QGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQS 361

Query: 363 RVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGIGE 422
           RVLEE+L+R+ IPYR+YGG RF++R EI+NA+AYLRL++ R +DAA ERV+N+P RGIG 
Sbjct: 362 RVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIGA 421

Query: 423 KTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLHLM 482
           K++  +R++A    +S+WE+   L+    + GRA   L  F+ +IE L+    +  LH +
Sbjct: 422 KSLAELREYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHGL 481

Query: 483 TQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHASL 542
            +  IE SGL  YH +EKGEKGQARVENLEELV+   A  + E ++ +  L+ F+  A+L
Sbjct: 482 MKQTIENSGLKDYHASEKGEKGQARVENLEELVN---ALSDYEVEDGVDALSEFIAQAAL 538

Query: 543 EAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRLAY 602
           +AG++QA +HEDS+QLMTLHSAKGLEFP VFL G+EEGLFPH MSLEEPGR+EEERRLAY
Sbjct: 539 DAGESQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLAY 598

Query: 603 VGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQQQ 662
           VGITRAM+ LV+TYAE+RRLYG E +N +SRFVRE+P   +QEVRL N+V+RP     ++
Sbjct: 599 VGITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRP--AMVER 656

Query: 663 NSSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMGYA 722
            + SMF+     ++ FSLGQ+VRH  FGEG+++N EG G   RVQVNF EG+KWL++ YA
Sbjct: 657 PNESMFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYA 716

Query: 723 KLEA 726
            LEA
Sbjct: 717 PLEA 720