Pairwise Alignments

Query, 481 a.a., alanine:cation symporter family protein from Pseudomonas fluorescens SBW25

Subject, 457 a.a., amino acid carrier protein (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (685), Expect = 3e-76
 Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 25/439 (5%)

Query: 1   MLEVINDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSSGQ--LSSF 58
           +L  IN  + G + + L+VG G Y T+R R +Q+   F +    +   K +SGQ  LSSF
Sbjct: 6   LLSEINAIVWGPITLCLLVGTGLYLTLRLRLIQV---FKLPLALRLLFKPASGQGDLSSF 62

Query: 59  QALMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDA 118
            AL  +L+  +G GNI GV  A+ +GGPGA+FWMW+ A  GM++ + EC L   Y+ TDA
Sbjct: 63  AALCTALSATIGTGNIVGVATAIKVGGPGALFWMWLAAFFGMATKYGECMLALKYRTTDA 122

Query: 119 EGTYRGGPAYYIQHGLHKRWLGMVMAFLLLVTFGFAFNGL----QAHAVTHSLNNAFGLD 174
            G   GGP YYI+ GL   WL  + A   L   G AF G+    Q +A++ ++  AF + 
Sbjct: 123 RGNIAGGPMYYIERGLGLGWLAKLFA---LFGVGVAFFGIGTFAQVNAISDAMTIAFHVP 179

Query: 175 TTYTGLALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATI 234
              T L L +L+  V +GG+KRIA +A  LVP   L Y+   L+++V   + +   L  +
Sbjct: 180 AWVTALVLTLLVAAVTLGGVKRIAKVAQKLVPSMALGYVLACLWILVTFSEQIIPALQLV 239

Query: 235 VKSAFGLDQAFGGLVGS----AIIMGVKRGVFANEAGLGSAPNVAAVASVEHPIAQGVVQ 290
           + SAF    A GG +G+    AI +G+ RGVF+NE+GLGSAP  AA A  + P+ QG+V 
Sbjct: 240 IHSAFSPISAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLVS 299

Query: 291 AFSVFLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGD---WGRMFISVAL 347
               F DT +ICT T L+++++G ++    GD       S A   G     G+  +++AL
Sbjct: 300 MTGTFFDTLLICTITGLVLIITGVWS----GDAAGAAMTSAAFATGGSAVIGQYLVTIAL 355

Query: 348 ALFVFTSIMYNYYLGESNLRFLVGN--NRKVLMGYRALVLVLIFWGSIENLGTVFAFADI 405
             F FT+I+  +Y GE    +L G+    + +  Y+ + L LI  G+   L  ++  AD 
Sbjct: 356 VCFAFTTILGWHYYGERCWYYLTGHKLGERGIKIYQFIFLSLIAVGAFIQLDLIWLLADT 415

Query: 406 TMTMLAFVNLFALAFLFKI 424
              ++A  NL AL  L K+
Sbjct: 416 VNGLMAIPNLIALIGLRKV 434