Pairwise Alignments

Query, 415 a.a., diaminopimelate decarboxylase from Pseudomonas fluorescens SBW25

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella loihica PV-4

 Score =  527 bits (1357), Expect = e-154
 Identities = 258/414 (62%), Positives = 319/414 (77%)

Query: 1   MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK 60
           MD F Y+  EL+AE   ++++AE +GTP YVYSRA +E  + +F +A+   PH++CYAVK
Sbjct: 1   MDHFLYQQDELYAEQCTVASLAETYGTPLYVYSRATLERHWHAFDNAVADHPHMICYAVK 60

Query: 61  ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVH 120
           ANSNL VLNVLARLG+GFDIVS GEL RVL AGG+A K+VFSGVGKT  +M  ALE G++
Sbjct: 61  ANSNLAVLNVLARLGSGFDIVSGGELARVLEAGGEASKVVFSGVGKTVAEMEMALEAGIY 120

Query: 121 CFNIESTDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180
           CFN+ES  ELE+L  VA  +G  AP+SLRVNPDVDAGTHPYISTGLKENKFGIA+ +AE 
Sbjct: 121 CFNVESAAELEQLNLVALRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMEEAEA 180

Query: 181 VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV 240
           +++RA +LP L V G DCHIGSQLT L PFLDA+DR+LALIDRL E G+ + H+D+GGG+
Sbjct: 181 IFLRANELPGLAVKGADCHIGSQLTELQPFLDAMDRMLALIDRLAEQGVKIAHLDVGGGL 240

Query: 241 GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF 300
           GV Y  E+PP  + Y  A+  ++ GRDL L+FEPGR I ANAG+ +TQV YLK    K+F
Sbjct: 241 GVTYDGEQPPEPSAYASALLGKLAGRDLKLIFEPGRAIAANAGIFVTQVLYLKENAEKNF 300

Query: 301 AIVDAAMNDLIRPALYQAWMNVTAVTPRNSEARAYDIVGPICETGDFLAKDRQLALEEGD 360
           A+VD AMNDLIRP+LY AW  +  V PR  E R YD+VGP+CETGDFL KDR L +   D
Sbjct: 301 ALVDGAMNDLIRPSLYSAWQKIIPVVPRPGETRQYDVVGPVCETGDFLGKDRALNIRAND 360

Query: 361 LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLP 414
           LLAV S+GAYGF M+SNYN+R R AEV+VDG++ + VR RE VA+L+ GE LLP
Sbjct: 361 LLAVRSSGAYGFTMASNYNSRPRAAEVMVDGERHYLVREREKVAQLWQGEQLLP 414