Pairwise Alignments

Query, 415 a.a., diaminopimelate decarboxylase from Pseudomonas fluorescens SBW25

Subject, 414 a.a., diaminopimelate decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  528 bits (1359), Expect = e-154
 Identities = 260/414 (62%), Positives = 320/414 (77%)

Query: 1   MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK 60
           MD F Y+D  L+AEG  ++ +A+ +GTP Y+YSRA +E  + +F +A+ G PHLVCYAVK
Sbjct: 1   MDHFLYQDNTLYAEGCRVNDLAQTYGTPLYIYSRATLERHWHAFNNAVAGHPHLVCYAVK 60

Query: 61  ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVH 120
           ANSNL VLNVLARLG+GFDIVS GEL RV+ AGG   K+VFSGVGKT  +M +AL +G++
Sbjct: 61  ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120

Query: 121 CFNIESTDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180
           CFN+ES+ ELE+L  VA  +G  AP+SLRVNPDVDAGTHPYISTGLKENKFGIA+ +AE 
Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEA 180

Query: 181 VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV 240
           V+ RA  LP+L+V GVDCHIGSQLT + PFLDA+DR+L+LIDRL E GI + H D+GGG+
Sbjct: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGL 240

Query: 241 GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF 300
           GV Y DE PP    Y  A+ +R+  R L L+FEPGR I ANAG+ +T+V YLK    K F
Sbjct: 241 GVTYDDETPPHPDVYAAALLKRLGHRKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKRF 300

Query: 301 AIVDAAMNDLIRPALYQAWMNVTAVTPRNSEARAYDIVGPICETGDFLAKDRQLALEEGD 360
           AIVD AMNDLIRPALY AW  +  VTPR+ +A  +DIVGP+CETGDFL KDR+ A+  GD
Sbjct: 301 AIVDGAMNDLIRPALYSAWQKIIPVTPRDDQAHVFDIVGPVCETGDFLGKDREFAIAPGD 360

Query: 361 LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLP 414
           LL V S+GAYGF M+SNYNTR R AEV+VDGD+A+ VR RE + +L+ GE LLP
Sbjct: 361 LLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLPQLWQGEQLLP 414