Pairwise Alignments

Query, 415 a.a., diaminopimelate decarboxylase from Pseudomonas fluorescens SBW25

Subject, 421 a.a., diaminopimelate decarboxylase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  193 bits (491), Expect = 7e-54
 Identities = 143/418 (34%), Positives = 211/418 (50%), Gaps = 26/418 (6%)

Query: 6   YRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVKANSNL 65
           Y D   F    + + + E +G+P YVYS A +  + R            V Y+ KANSNL
Sbjct: 8   YTDAVGFFGLTSPTELVETYGSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNL 67

Query: 66  GVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVHCFNIE 125
            +L+++   G   D +S GEL   L AG   DKI++     + E++  A+  G+    + 
Sbjct: 68  ALLHIIREEGLVVDAMSPGELFMNLRAGFSPDKILYVCNNVSAEELGNAVSHGL----LV 123

Query: 126 STDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRA 185
           S D L +L  +  E+     + +R NP + AG H  + T  KE KFG+  A  ++V    
Sbjct: 124 SVDSLSQLD-LYGEVNPGGRVMVRFNPGIGAGHHKKVVTAGKETKFGVDPASIDEVRTIL 182

Query: 186 AQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGVGVRYR 245
           A+  NL + G++ HIGS       +++A   LL L +R  +  +    ID GGG G+ Y 
Sbjct: 183 AR-HNLTLAGINQHIGSLFLEPESYVEAARFLLTLAERFDDVEV----IDFGGGFGIPYH 237

Query: 246 --DEEPPL--------IADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHT 295
             D +P L          D I    +R  G     + EPGRY+VA  G+LL  V  +K  
Sbjct: 238 KYDNQPRLDLTAMGAQFDDLISGWAQR-RGYRGRFLVEPGRYVVAECGLLLGSVHSVKSN 296

Query: 296 EHKDFAIVDAAMNDLIRPALYQAWMNVTAVTPRNSEA---RAYDIVGPICETGDFLAKDR 352
               +   D   N L RP +Y A  ++       + +       +VG ICE+GD +A++R
Sbjct: 297 GANRYVGTDLGFNVLARPVMYDAHHDIEVYREDGAPSDLLLPQTVVGNICESGDIIARNR 356

Query: 353 QL-ALEEGDLLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGD-QAFEVRRRETVAELYA 408
            L  +EEGD+L V  AGAYG+VMSS+YN R R AEVL+D + +   VRRRET+ +L A
Sbjct: 357 PLPPVEEGDILGVLDAGAYGYVMSSSYNQRMRPAEVLIDLEGRPRLVRRRETLDDLVA 414