Pairwise Alignments

Query, 228 a.a., YggS family pyridoxal phosphate-dependent enzyme from Pseudomonas fluorescens SBW25

Subject, 233 a.a., alanine racemase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  239 bits (609), Expect = 4e-68
 Identities = 131/232 (56%), Positives = 162/232 (69%), Gaps = 5/232 (2%)

Query: 1   MSTIADNIGQVSQRIRAAADAVQRDASSIHLLAVSKTKPAPAVREAYAAGMRDFGENYLQ 60
           M+TIAD +    QRI  AA    RD+  I LLAVSKTKP   +  AY AG R FGENY+Q
Sbjct: 1   MTTIADRLADAHQRIAQAAQNSSRDSREIQLLAVSKTKPIDQIVAAYDAGQRLFGENYVQ 60

Query: 61  EALGKQAELTDL--PLSWHFIGPIQSNKTRAIAENFAWVHSVDRLKIAQRLSEQRPADLP 118
           E   K   L +    + WHFIGP+QSNKT++IAE+F W+H++ R KIA+RLSEQRP+ L 
Sbjct: 61  EGEEKINALRESHGDIEWHFIGPLQSNKTKSIAEHFDWMHTLSREKIAKRLSEQRPSHLA 120

Query: 119 PLNICIQVNVSGEASKSGCTPADLPDLANAISALPRLKLRGLMAIPEPTEDRAAQDAAFA 178
           PL +CIQVNVS E SKSG  P ++  LA  I++LPRL LRGLMAIP  T+D A Q A F+
Sbjct: 121 PLQVCIQVNVSQEQSKSGVNPDEVAHLAEIIASLPRLTLRGLMAIPTATDDVALQQAEFS 180

Query: 179 AVRDLQNSL---NLPLDTLSMGMSHDLESAIAQGATWVRIGTALFGARDYGQ 227
            ++ L  +L   +  LDTLSMGMS DLE AIA G+T VRIG+A+FGARDY +
Sbjct: 181 QMQALFEALKQQHPSLDTLSMGMSQDLEQAIAAGSTMVRIGSAIFGARDYAK 232