Pairwise Alignments

Query, 228 a.a., YggS family pyridoxal phosphate-dependent enzyme from Pseudomonas fluorescens SBW25

Subject, 237 a.a., conserved hypothetical protein TIGR00044 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  226 bits (577), Expect = 2e-64
 Identities = 122/230 (53%), Positives = 157/230 (68%), Gaps = 5/230 (2%)

Query: 1   MSTIADNIGQVSQRIRAAADAVQRDASSIHLLAVSKTKPAPAVREAYAAGMRDFGENYLQ 60
           M+TIAD +     RI  AA    R   SIHLLAVSKTKP   +  AY AG R FGENY+Q
Sbjct: 1   MTTIADRLAVAQSRIAQAAQKCARLPHSIHLLAVSKTKPIADIIAAYDAGQRCFGENYVQ 60

Query: 61  EALGKQAEL--TDLPLSWHFIGPIQSNKTRAIAENFAWVHSVDRLKIAQRLSEQRPADLP 118
           E + K   L  T   + WHFIGP+QSNKT  +A++F W+H++ R KIA RL+EQRPA+L 
Sbjct: 61  EGVTKIESLKTTHPDIEWHFIGPLQSNKTTLVAQHFDWMHTLSREKIALRLNEQRPANLA 120

Query: 119 PLNICIQVNVSGEASKSGCTPADLPDLANAISALPRLKLRGLMAIPEPTEDRAAQDAAFA 178
           PLN+CIQ+N+S E +KSG     +  LAN+IS LP+L+LRGLMAIP  T+D   Q    +
Sbjct: 121 PLNVCIQINISDEDTKSGINAQQMLPLANSISQLPQLRLRGLMAIPSATDDTEQQTRELS 180

Query: 179 AVRDLQNSLNL---PLDTLSMGMSHDLESAIAQGATWVRIGTALFGARDY 225
            ++ L ++L      +DTLSMGMS+DL+ AIA G+T VRIG+A+FG RDY
Sbjct: 181 ELKHLFDTLKQHYPDVDTLSMGMSNDLDLAIAYGSTMVRIGSAIFGERDY 230