Pairwise Alignments

Query, 628 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens SBW25

Subject, 578 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  446 bits (1148), Expect = e-129
 Identities = 271/583 (46%), Positives = 346/583 (59%), Gaps = 39/583 (6%)

Query: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           MSF+SLGLS  + +A+   GY  P+P+Q +AIPAVL G+D+M AAQTGTGKT GF LP+L
Sbjct: 1   MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60

Query: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN 120
           E L       K  +    Q R LVLTPTRELAAQV +S + Y + L   SA +FGGV +N
Sbjct: 61  ELL------SKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPIN 114

Query: 121 PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
           PQ+Q +  GVDVLVA PGRLLDL  Q +V  + +E+LVLDEADRMLDMGF+ D+KK+LA 
Sbjct: 115 PQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAM 174

Query: 181 LPAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRALL 240
           LPAKRQNL+FSATFS +I  LA  L++ P  I VTP N     ++Q +  +  + K ALL
Sbjct: 175 LPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALL 234

Query: 241 AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGSV 300
             LI    W+QVLVF+RTKHGANRLA+ L +  ++A AIHGNKSQ ARTKALADFK+G V
Sbjct: 235 IQLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEV 294

Query: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           R+LVATDIAARGLDIDQLP VVNF+LPNV EDYVHRIGRTGRAG  G+A+SLV+ +E KL
Sbjct: 295 RVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKL 354

Query: 361 LKSIERMTKQKIADGDLMGFD------ASAVEAEKPEVRERPDVRNPRNPRGPKGDGPNG 414
           L+ IER+  + +   ++ GF        S + A   E + +  V + R  R      P  
Sbjct: 355 LRDIERLINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKA-VASQRKHRSAGKPAPRA 413

Query: 415 GGGGGGRRDKG-KDKGGKEKAPTNGRGERPAREQKPREGTPARE-QRQPSQPPRAAADRA 472
           G G  GR+    K     + A   G+  +P   Q+  +G  + + QR   Q  R      
Sbjct: 414 GSGRDGRKTPAPKTADNGDLAQQKGQNAQPNSSQRNNQGQRSHQGQRNQHQEQR------ 467

Query: 473 PDEFLDDDVDNFGNRVDYVPQAKPAQGRGRRPGAPAQGAGAGAPRGGQPQGARQNGPRNS 532
                     N          AK A+ +     APA    A +P+       R  GP NS
Sbjct: 468 ----------NHQGESKRPQAAKNAEHK----NAPATAEQARSPKPQDKYPQRSKGPANS 513

Query: 533 SGGTTGTPPAKRSGPRNGAPRDG-QARREDSRSNNRRPARDDQ 574
           S        A R     G    G Q R +++R +     + +Q
Sbjct: 514 S---NSEHKANREHKAKGQSHSGSQQRSQEARHHEGSSEKTNQ 553