Pairwise Alignments

Query, 394 a.a., murein transglycosylase A from Pseudomonas fluorescens SBW25

Subject, 398 a.a., murein degrading transglycosylase protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  220 bits (560), Expect = 6e-62
 Identities = 148/388 (38%), Positives = 205/388 (52%), Gaps = 38/388 (9%)

Query: 15  ALPMIALLAGCDAGKETAKDETSKPHAVA---TYVSAPWEALPTVSDSDLLAGFESWRSA 71
           A+  + LLA C  G  +     S+P  VA   +Y     E LP  S   +      +R +
Sbjct: 20  AMAGVLLLAAC-GGPSSRPGLVSRPAGVAGPVSYQRVAIEGLPGWSTDRVADALPVFRRS 78

Query: 72  CQRLKA--------DPVWG-------ATCAAAATVPS-NAVAVRGFLKERLDVFGLRSAD 115
           C+RL+A          VWG       A CA AA +P+ +  A R F  ER   + +  A 
Sbjct: 79  CERLRAVSPNSMVGPSVWGSRASDWQAACAVAARLPAFDDDAARRFFAERFQAWQVTGAG 138

Query: 116 NTPNGLITGYYEPVYPGSLTKTAKANVPVYGVPDDLIIVNLESIYPELKGKRLRGRLEGR 175
           + P GL TGYYE    GSL+ +A  + P+YGVP DL +          KG R+ G   GR
Sbjct: 139 D-PTGLFTGYYEAALDGSLSPSAVYSTPIYGVPLDLRMEGG-------KGMRVSG---GR 187

Query: 176 VLKPYDDASAIN--GQGSTAKPIAWLTNPMDLQFLQIQGSGRIQLAGGRQLRVGYGDQNG 233
            L PY D +AI        A  I W  +P+D+  L IQGSG+++L  GR  R+GY   NG
Sbjct: 188 SL-PYPDRAAIEEGAISGVAPVIMWARDPVDVFMLHIQGSGQVRLPDGRIQRIGYAANNG 246

Query: 234 YPYRPIGRWLVEQGELKKEDVTMGAISAWAKAHPQRIPELLASNPSYVFFSARPDSNEGP 293
           +P+  IG  + ++G    +  +M AI AW +A+P     L+  NP ++FF  RP   EGP
Sbjct: 247 HPFVGIGAIMRDRG--LGDGSSMIAIRAWLRANPAEGRALMRENPRFIFF--RPIEGEGP 302

Query: 294 RGSLNVPLTAGYSVAVDRKVIPLGSLLWLSTTKPDGSPIARPVAAQDTGGAITGEVRADL 353
            G+  +PLT G S+AVD   +PLG+ +WL+T+   G  + R + AQDTG AI G VR D 
Sbjct: 303 IGAQGLPLTGGRSLAVDPSSVPLGAPVWLATSDAHGETVNRLMVAQDTGSAIKGAVRGDF 362

Query: 354 FWGTGDAAGELAGNMKQQGQIWMLWPKG 381
           FWG+G+ A   AG MK  G+ W+L P+G
Sbjct: 363 FWGSGEEALYHAGGMKSAGRYWVLVPRG 390