Pairwise Alignments

Query, 294 a.a., sugar nucleotide-binding protein from Pseudomonas fluorescens SBW25

Subject, 328 a.a., dTDP-4-dehydrorhamnose reductase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 20/227 (8%)

Query: 2   RMRLMLLGGGNALGQALIRLGAEEDIGF-LAP--KPPKDGWDAASLTQLLDDTRPDALIN 58
           R  ++L G  + L +ALIR      + F L P      D  D  S+ ++    +PD +IN
Sbjct: 8   RPTVLLTGAHSQLAKALIRTHLNGGLVFNLHPLTHAALDISDKYSVAEVFAQVKPDWVIN 67

Query: 59  LAYYFDWFQAEVVSETRLAAQEFAIERLAELCQHHNITLLQPSSYRVFD----GSRATAY 114
            A Y    +AE   +          E LA  C      L+  SS  VF     G  A A 
Sbjct: 68  CAAYNAVDKAETAVDEAYRVNSLGPELLATECALTGARLVHISSDYVFSGLLTGVEANAL 127

Query: 115 SEKDEPVPLGLRGQALWRIEQSV-RATCPQHVLLRFGWLLDDSVDG-----TLGRFLARA 168
           SE   P PL + G++    EQ+V R    + +++R  WL    VDG     T+ R +A  
Sbjct: 128 SETVTPSPLSVYGKSKLAGEQAVQRILGERAIVIRTAWLY--GVDGHNFVKTMLRLMAAT 185

Query: 169 EKPDELLMADDRRGNPTPVDDAARVIISVLKQLDCAAPLWGTYHYAG 215
                L + DD+ G+PT VD  A +I  ++ + +      G +HYAG
Sbjct: 186 PDAQPLFVIDDQIGSPTWVDALASLIWQLMLRGES-----GLFHYAG 227