Pairwise Alignments

Query, 631 a.a., TonB-dependent receptor from Pseudomonas fluorescens SBW25

Subject, 617 a.a., TonB-dependent vitamin B12 receptor from Pseudomonas stutzeri RCH2

 Score =  368 bits (944), Expect = e-106
 Identities = 236/614 (38%), Positives = 331/614 (53%), Gaps = 23/614 (3%)

Query: 3   RLRLALPLLLLCAPDLLADTRDDALKLPNVVISANRQVQARNDSSAANTVFTRDDIDRLQ 62
           R + A  +LL   P  +       L L   V++A R  Q    S AA TV  R+ I+R Q
Sbjct: 6   RFKPAAYVLLGSFPLSIGQLAAAPLDLQQQVVTATRTAQTAQQSLAAVTVIDRERIERSQ 65

Query: 63  PTRLTDLLSRVPGVQVAPSGGRGSLPGIYMRGTKSAQSLVLVDGQRIANTTSGDSGLQYL 122
            + L +LL +VPGV +A +GG G    ++MRGT+S   LV++DG +I + + G + LQ L
Sbjct: 66  ASSLPELLKQVPGVSLANNGGPGKSTSLFMRGTESDHVLVMIDGIKIGSVSGGGAALQDL 125

Query: 123 NVDQIERVEVLRGSRSVIYGSDAIGGVIQVFTRRNAEPGVQPRLKLGFGSHQTWERSLGL 182
            ++ IER+EV+RG RS +YGS+AIGGVIQ+FTR+    GV+P    G+G+H T+  S G+
Sbjct: 126 PLELIERIEVVRGPRSSLYGSEAIGGVIQIFTRKGQGQGVKPFFSAGYGTHDTYTGSAGV 185

Query: 183 SGGDEQTRFNLGASLDDTAGIN--STHTSFPSDGDHDAYRNQSLSLNLSHSFSDGLEAGF 240
           SGGD +  ++LG S  DT GIN  S  TS   + D D YRN S +L+  + F +GLE   
Sbjct: 186 SGGDGRGWYSLGVSGSDTDGINVKSADTS-GYERDADGYRNLSATLSAGYRFDNGLELDA 244

Query: 241 NLLDNRGKSEYDNSFGRYDLATGQTVGQKPYTDYAVSSASGYVDATLNEHWQSRLELGHS 300
           NLL  +  ++YD+      +   +T G     D            +  E W   L+ G S
Sbjct: 245 NLLQAKSHNDYDS------VNRARTSGFGANADGESRVFGTRARFSPLEPWLVTLQAGRS 298

Query: 301 ENRDTKRDTLSDD--FSVFNTYRDSVNWQNDLTLNDQNSLILGGDWYEDRFHGSTTFTQN 358
           E+   K D   D   +S F++ RD+++WQND+ L   ++LILG D   D  +G+T + ++
Sbjct: 299 ED---KSDAYQDGQFYSRFDSRRDTLSWQNDIELAAGHTLILGADHQRDEVNGTTVYAED 355

Query: 359 SRWNRAAFVQHRFHGEWFSTELGLRRDQNQQFGGQNSWSGTVTVPVNPDNDLLLTYSEGF 418
           SR N   F Q+         +L LRRD N+QFG  ++ +      +       ++Y   F
Sbjct: 356 SRDNDGYFAQYLGEVGRHDWQLSLRRDDNEQFGQHDTGNIGYGYALTDWLRGTISYGTAF 415

Query: 419 RAPTFNDLYYPDTQYSNPDLQPETSKSYELQWRSQLSDSTRLEASLYRTDLSDAIILDRS 478
           +APTFN+LY+PD  Y NP+L  ETS+S E+    Q         + YRT + D I  D S
Sbjct: 416 KAPTFNELYFPD--YGNPELDAETSESLEVGLAGQ-HGWGHWAVNAYRTVVDDLIAYDAS 472

Query: 479 -GKPQNVASARINGFEAALKQELFGWQGNLGLSLIDPRDRDS----GHTLARRARQTLNL 533
              P NV  ARI G E  L  +L GW  N   SL++P +R +    G+ LARRA+Q  NL
Sbjct: 473 ISAPANVQEARIRGVELVLGSQLLGWDWNANYSLLEPENRSAGANRGNELARRAKQLFNL 532

Query: 534 DLDRQFDTLGLGASWQAISSSYDDEDNTHRLGGYALLGLRSSWALNRQVALSLKVDNLLD 593
           DLDR+     +GAS  A    YDD  NT  L GYA L LR  + +  +  L  +V NLLD
Sbjct: 533 DLDRRLGAFSVGASLHAEGQRYDDLANTRELSGYATLDLRGEYRITPEWRLQARVANLLD 592

Query: 594 RSYARARYSYNDPG 607
             Y  A   YN PG
Sbjct: 593 ADYETAE-GYNQPG 605