Pairwise Alignments

Query, 836 a.a., ATP-dependent helicase HrpB from Pseudomonas fluorescens SBW25

Subject, 1360 a.a., ATP-dependent helicase HrpA from Pseudomonas stutzeri RCH2

 Score =  258 bits (660), Expect = 1e-72
 Identities = 175/471 (37%), Positives = 257/471 (54%), Gaps = 27/471 (5%)

Query: 2   NSLPIDDVLPALRDALAIRHEAVLEAPPGAGKTTRVPLALLNEPWLTGQTILMLEPRRLA 61
           +SLPI      ++ AL      V+    G+GKTT++P   L         I   +PRRLA
Sbjct: 70  DSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLIGHTQPRRLA 129

Query: 62  ARAAAERLASELGEKVGETVGYRIRLDSKVGPNTRIEVVTEGILTRRLQDDPALDGVGLL 121
           AR+ A R+A E+G  +GE VGY++R + +   ++ I+++T+GIL    Q D  L+    +
Sbjct: 130 ARSVATRVAEEIGTPLGELVGYQVRFEDQSKDSSLIKLMTDGILLAETQHDRFLERYDTI 189

Query: 122 IFDEFHERSLDADLALALSLNGRELFRDEQPLKILLMSATLEGERLASLLDDAPILRSEG 181
           I DE HERSL+ D  L      + L      LK+++ SAT++ +R +   D API+   G
Sbjct: 190 IVDEAHERSLNIDFLLGFL---KTLLPRRPDLKVIITSATIDLQRFSEHFDGAPIVEVSG 246

Query: 182 RMFPVQMRWGRPY-----QPGEFIEP--RVVQTILEALHDET----------GSVLVFLP 224
           R +PV+  W RP      + G  +E    V Q IL AL + T          G VLVFLP
Sbjct: 247 RTYPVET-WYRPLAAEIDEDGNRVEDDLTVDQGILAALDEITAHEQSVGKRPGDVLVFLP 305

Query: 225 GQAEIRRVSQQLADALGDRTDVLLCPLHGELDLNAQRAAIDPAPAGKRKVVLATNIAETS 284
           G+ EIR  ++ L  A    T+VL  PL+  L    Q+    P P   RK+VLATN+AETS
Sbjct: 306 GEREIRDAAEVLRKANLKFTEVL--PLYARLTPAEQQKIFQPRPG--RKIVLATNVAETS 361

Query: 285 LTINGVRVVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSE 344
           LT+ G+R VID+G AR+ R+   + + RL  + +S+ASA QR GR GR+EPG+C RL+SE
Sbjct: 362 LTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYSE 421

Query: 345 DQHEGLAAYGSAEILAADLAGLALQLARWGVTPAQ-LVWLDVPPTAAYAQAQDLLQRLGA 403
           +   G   +   EIL  +LA + LQ+    +   Q   +++ P   A +   +LLQ L A
Sbjct: 422 EDFLGRPEFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELSA 481

Query: 404 LN-DDTLTAHGQKMAELPAHPRIAHLLLRGQDLGLAATACDVAALLGERDI 453
           +N ++ LT  G+++A LP  PR+  +LL     G  A    VA+ L  +D+
Sbjct: 482 VNRENQLTPMGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDV 532