Pairwise Alignments

Query, 203 a.a., 3'-5' exonuclease from Pseudomonas fluorescens SBW25

Subject, 230 a.a., DNA polymerase III, epsilon subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 9/168 (5%)

Query: 3   RIAVIDFETTGITPNSHCRATEIAVVIL----ERGQIVDRYQSLMNAGVRVPGFIEQLTG 58
           R  V+D ETTG+ P +  R  EI  + L      G  +  Y   +N    +P    ++ G
Sbjct: 2   REIVLDTETTGLDPATGDRLVEIGCIELINHMPSGNDLHLY---VNPERDMPPEAFRVHG 58

Query: 59  ISNAMLRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDYELGLIRRTRL--QKFACS 116
           +S A L   P    V++E   F+G   L+ HNAAFD KF + EL  ++R  L   +   +
Sbjct: 59  LSEAFLADKPLFAEVVDEFLAFIGEDRLIIHNAAFDMKFLNAELARLKRPPLPMSRALDT 118

Query: 117 LLLARRLMPTAPNHKLGTLNAFAQLPHTGKAHRAMADAEMAANLTAHL 164
           L +A+   P A          F     +   H A+ D  + A +   L
Sbjct: 119 LRMAQARFPGAQASLDALCRRFGVDTSSRTKHGALIDCVLLAEVYLEL 166