Pairwise Alignments

Query, 203 a.a., 3'-5' exonuclease from Pseudomonas fluorescens SBW25

Subject, 212 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (419), Expect = 4e-46
 Identities = 88/197 (44%), Positives = 118/197 (59%)

Query: 4   IAVIDFETTGITPNSHCRATEIAVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGISNAM 63
           + V+DFET+G++PN   RA EI  V++E+GQI  R+  LMN G R+  FIE  TGISN M
Sbjct: 13  LVVLDFETSGLSPNQGARAIEIGAVLIEQGQITTRFSELMNPGFRINAFIEDYTGISNQM 72

Query: 64  LRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDYELGLIRRTRLQKFACSLLLARRL 123
           L  A P   VM    EF+G   L+AHNAAFDQ+F D E   I      +F CSLLLARRL
Sbjct: 73  LAHAAPCAEVMARFAEFIGKHHLVAHNAAFDQRFLDAEFAHIGHQYSGQFGCSLLLARRL 132

Query: 124 MPTAPNHKLGTLNAFAQLPHTGKAHRAMADAEMAANLTAHLAQELRSTHGLRELSHELLC 183
            P A NH+L TL    QLP+ G  HRA+ADAEM  +L   +  +L+    + E    L+ 
Sbjct: 133 YPEAINHQLATLVRHKQLPNNGTFHRALADAEMTGHLWLRMLADLKQDFAIVEPPFSLMQ 192

Query: 184 TLQKVPAAKINEHLKKH 200
            +     A++ + L+++
Sbjct: 193 KVMSKSKAEVPKFLRQY 209