Pairwise Alignments

Query, 1149 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas fluorescens SBW25

Subject, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

 Score =  626 bits (1614), Expect = 0.0
 Identities = 422/1144 (36%), Positives = 606/1144 (52%), Gaps = 155/1144 (13%)

Query: 11   FMVVHGNRLDELRSLVVSWMRRYPLA-PLENEIALVQSNGIAQWLKLALAEDPEDDDMGG 69
            F V H N+++ L+ L+V  ++  PL  P   E  LVQS G++QWLK+ALA +        
Sbjct: 2    FTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASE-------- 53

Query: 70   CGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPELIDQPHFEPL 129
             G+AA ++  LP +F+WQ++  VL   ++P +S  +K  ++WRLM LLP+L+D+  F+PL
Sbjct: 54   LGVAANLEFPLPATFIWQMFTQVL--PDVPQRSAFNKEAMSWRLMELLPKLLDRTEFQPL 111

Query: 130  QRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNLANC 189
            QR+L  D D  KR+QLAE++AD+FD Y VYR DW+  W AG   +     +  P      
Sbjct: 112  QRYLQDDEDDSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVEIA--DQHP------ 163

Query: 190  WQAELWRALLLDVGEEGMA-ESRAGVHQRFIERINTLEHAPPGLPSRVIVFGISSLPAQA 248
            WQ  LWR L     ++G +   RA ++QRFIE++ + +      P R+ +FGIS+LP + 
Sbjct: 164  WQPILWRELYAYTHKQGHSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGISALPPRY 223

Query: 249  LEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARK----SGMPVTIDPQT 304
            ++AL  +     V L + NPC+H+W DI   K L R     Q RK    +G  VTI  + 
Sbjct: 224  IDALRAMGEHIDVHLMLTNPCQHYWGDIRDRKYLAR--VAAQKRKILQINGEQVTIGSEV 281

Query: 305  L-----------------HQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDL 347
                              H   + LLA+ GK GRD + LL   D             ++L
Sbjct: 282  SPLKGDVENYLQESMHLSHAVGNSLLASMGKMGRDNLYLLAQNDQ----------SELEL 331

Query: 348  FSDSEPTTLLNQLQDDILELRPLNETRELW-----PAVDLDRDTSIRFHIAHSAQREVEI 402
            F + +  +LL+ +Q DIL L+   +  +       P++   +D S++  + HS  REVE+
Sbjct: 332  FIEIQRDSLLHHIQADILHLQEHQDDAKFASSGHKPSIAA-QDDSLQIALCHSPIREVEV 390

Query: 403  LHDQLLQRFSADPALRPRDIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRG 462
            LHD+LL  F  DP+L+PRD+IVMVPD+++YAP+I+AVFG       RFIPF+++D+    
Sbjct: 391  LHDRLLAEFERDPSLKPRDVIVMVPDINAYAPYIQAVFGNAPGE--RFIPFSISDRSADQ 448

Query: 463  RDPLLIAVEHLLKLPDSRFPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGL 522
              P+L A   LL LP SR   SE+L+LL+ PA+  RFAI E +  T  RW+E AGIRWGL
Sbjct: 449  ESPILTAFLQLLALPQSRCLASELLELLETPAIMARFAIDEEEFATAKRWVEEAGIRWGL 508

Query: 523  NAEQRAGLGLPTELEQNSWRFGLRRMLLGYAVGTGAAC-----DGIEPYDEIGGLDAALI 577
            N++  A   LP   EQN+W+FG+ RMLLGYA+   A         + PY+++ G+ A L 
Sbjct: 509  NSDTGAEFELPAS-EQNTWQFGIERMLLGYAMPAEAGLYELGGQWLAPYNQVQGMSAELA 567

Query: 578  GPLVALLDALNDAHQALSQPAPPRVWGERLQRLMQLFFLPSSEHD-------DYLLGQLE 630
            G L   +  L++    L+Q      W   L  L++  F    + +       D L+   +
Sbjct: 568  GKLAHFVQTLSELRSQLAQTQSMEQWRYWLNELLERCFSVDLQGELALKTIRDSLVNLKQ 627

Query: 631  QLRETWLETCESVGLQDELPLTVVREAWLAGLDQGRLSQRFLAGAVNFCTLMPMRAIPFK 690
            QL +         G Q  +   ++R+     L   R+SQRFLAG VNFCTLMPMR+IPF+
Sbjct: 628  QLADA--------GYQQAVSPAIIRQVLTNKLSGTRISQRFLAGQVNFCTLMPMRSIPFR 679

Query: 691  LVCLLGMNDGDYPRAQPPLDFDLMGSDYRPGDRSRREDDRYLLLEALLSARDQLYISWVG 750
             VCLLGMNDG YP  +    FDL     R GDRSRRE+ RYL LEALLSA++QLYIS+VG
Sbjct: 680  RVCLLGMNDGVYPPNEMVEGFDLRNVQRRVGDRSRREESRYLFLEALLSAKEQLYISYVG 739

Query: 751  RSIRDNSDRPASVLIGQL-----RDHLASGWHHANSDEP---LIDAMTQEHPLQPFSARY 802
            RSI+DNS+R  SVL+ +L     +++  +G  +  SD+    L++ +T ++P+ PFS + 
Sbjct: 740  RSIQDNSERVPSVLVSELLEYCEQNYCLAGDENLESDDSGRRLVEHLTTQYPMVPFSPQA 799

Query: 803  FHEGDALFSYAREW------QLLHEASDALPTEHDLAPHQQEEPLSLGQLQDFLRNPVKH 856
            F  G    S+AREW      Q    A    P    L        L L +LQ F R PV++
Sbjct: 800  FIAG----SFAREWLPAARRQGQSSADFLTPLSDYLLEVSWPMELDLVELQRFWRLPVEY 855

Query: 857  FFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLSAALTQPD--HLDQALNAQALR 914
            FF +RLKV FE     L D+EPF LD L  Y L D L+   L   D    DQ +   A +
Sbjct: 856  FFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVENLLACRDGAERDQVVAQFAKQ 915

Query: 915  LQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQLLALWPTPHPGAEPVSFEHH------- 967
             +  G LP+  FG+           +L +  QQ LAL       AE + F  H       
Sbjct: 916  QRAQGKLPVAAFGDL----------ELAQSAQQALAL-------AEKIGFLCHQPLEDEE 958

Query: 968  ------------GVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHV 1015
                         V L GW   L +R   GL+   +     G+I++     L+  W++H+
Sbjct: 959  IDLRLQPFDDGREVLLRGW---LVKRYQSGLVRARS-----GAIRSED---LLAAWIDHL 1007

Query: 1016 VACACGLPLSTGLVASD-----DTLLLPPL-DTSNAREILCNLLLAWHTGMSKPLPVAVK 1069
               A G  ++T L+  +        +LPPL D   A+ +L  L+  +  GM++PL    K
Sbjct: 1008 CLAASGKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPK 1067

Query: 1070 TAFA 1073
            TA A
Sbjct: 1068 TALA 1071