Pairwise Alignments

Query, 1224 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens SBW25

Subject, 1234 a.a., exodeoxyribonuclease V, beta subunit from Marinobacter adhaerens HP15

 Score = 1006 bits (2602), Expect = 0.0
 Identities = 577/1230 (46%), Positives = 749/1230 (60%), Gaps = 42/1230 (3%)

Query: 8    LAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDEAGFGRELLPPQILVVTFTDAAT 67
            LA  L GS LIEASAGTGKTFTI+ LY+RLVLG G       + LLPP +LVVTFT+AAT
Sbjct: 15   LALTLNGSALIEASAGTGKTFTIAILYVRLVLGQGQSPDSPLQNLLPPNLLVVTFTEAAT 74

Query: 68   KELRERIRIRLAEAARFFREEIEQPD-----ALIADLRAE-YP-PEQWPACANRLDIAAQ 120
            KELR+RIR RL +AA  F +  ++P+     ALI  LR E YP P  WP C  +L +AA+
Sbjct: 75   KELRDRIRTRLTQAAEVFSDAPDEPNPPAETALIYQLRDESYPDPASWPECRKKLLLAAE 134

Query: 121  WMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHDDA 180
            WMDEAAVSTIHS+C RML EHAFDSGSLF  TLETD S+LL EV RDYWR F YP+    
Sbjct: 135  WMDEAAVSTIHSFCNRMLSEHAFDSGSLFKLTLETDQSELLDEVARDYWRTFVYPLPPAL 194

Query: 181  LNWVRSNWGGPAALMPRVRALFGSERPTGETREPA-ELINACLQERREALQTLKA-PWQQ 238
            ++   S+W  P  L   VR L       G   E   + I+  +  R E  Q+LKA PW Q
Sbjct: 195  MDEALSHWKTPGDLRQGVRNLIDDPLSLGTPPESVHQAIDQVVHRRLEQSQSLKAHPWSQ 254

Query: 239  WAAELRDICLQAVAAKTVDGRKMQARYFEPWFEKISAWAADETL--EQLDIGTGFTRLTP 296
            W  ++ ++      +K + G    A   + W + + AWA  + L  E++D   GF   TP
Sbjct: 255  WRDDVIELLNDLNKSKRLHGASKNAM-IKVW-DLLVAWAESDDLLPEKIDSAAGFKNQTP 312

Query: 297  DGMAEAWKGEP--PQHPGIDAMAGLKAALDALPTPDAAVLQHAAGWVGKRFEDEKRRRAE 354
            +G+ +  KG+   P HP  DA+  L       P+  + +L+HA+ W+ +R E EK++R+E
Sbjct: 313  EGLDKILKGDDSAPHHPAFDAIGALLDFSQNQPSAKSDILRHASHWMAERLESEKQKRSE 372

Query: 355  MGFDDMLIRLNAALQADGGERLASVIREQFPVALIDEFQDTDPVQYSIFDSIYRIEENHL 414
            MGFDD+L RL+ AL    G++LA+ IR QFPVALIDEFQDTDPVQY IFD IY +     
Sbjct: 373  MGFDDLLTRLDDALHGPRGDQLAATIRRQFPVALIDEFQDTDPVQYRIFDRIYNVSGGDS 432

Query: 415  DSGLFLIGDPKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVNHVFQRA 474
             + L +IGDPKQAIY FRGADIYTYL+ARQ    R +TLG NFRS+  MV AVN VF  +
Sbjct: 433  GTCLLMIGDPKQAIYGFRGADIYTYLQARQGVKERTYTLGKNFRSAKTMVAAVNRVFDHS 492

Query: 475  ETGR--GAFLFREPNGENPVPFHSVLSQGRKEQLQVNGQTLPAMNLWHLPT--DQPVSNA 530
            +     GAFLF + +  +P+PF  V + G K    +NG+  P++  W   +  ++ V+  
Sbjct: 493  DQNSRDGAFLFGKGD-TSPLPFQGVDANGTKRSWSINGEVQPSLVFWTHESGEEEGVAKG 551

Query: 531  VYRQQLAAACATHIVELLNGGQQGTAGFLRPD--VSFTGVLPSDIAILVRDGKEAQAVRT 588
              R  +A  CA+ I  LL  GQ G AGF  PD       V P DIAILV +  EA AVR 
Sbjct: 552  AARADMAETCASEIARLLTLGQAGQAGFALPDNPSDLEPVAPKDIAILVNNRNEASAVRD 611

Query: 589  ELAARGVRSVYLSDKDSVFAAQEAHDLLAWLKACAEPDVERPLRAALACVTLNLSLPELE 648
             L  R ++SVYLSD+DSV  ++E+ ++L WL+A AEP     +RAALA  TL  S   + 
Sbjct: 612  ALGQRRIKSVYLSDRDSVLTSRESQEILCWLRAFAEPRQLAYIRAALATPTLGQSWHAMN 671

Query: 649  RLNQDELAWESRVMQFRGYRAIWRTQGVLPMLRRLLHDFKLPQTLIARSDGERVLTNLLH 708
            +L  DEL  E  + +F GY+  W+ QGVLPMLR  L DF++P  L+ R DGER LT++LH
Sbjct: 672  QLLTDELVLEREIERFIGYQQQWQKQGVLPMLRTFLMDFEVPGQLLQRPDGERRLTDILH 731

Query: 709  LSELLQQAASELDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEY 768
            ++ELLQQ + +LDGE AL+ H  + L  + +  E + LRLESD  LVKV+T+HKSKGLEY
Sbjct: 732  IAELLQQDSLQLDGEHALVHHYTQILRAADEEDEHRTLRLESDAGLVKVITVHKSKGLEY 791

Query: 769  DLVFLPFICSAKPVDGSRLPLHYHDEHGKSHVSLRPTPELIAQADNERLAEDLRLLYVAL 828
             LVFLPF  + +     +  + YH+E G+      P+P+ +A+AD ERL ED+R  YVAL
Sbjct: 792  PLVFLPFGTAFRAQSEKQAFVRYHNEQGRLVTVFDPSPDDVARADRERLGEDIRKFYVAL 851

Query: 829  TRAKHACWLGIADLKRGNSNSSVLHLSALGYLLGAGASLGESAGLARWLLDLQAGCPAID 888
            TRA+ A W+G A L            S LGYL+G   S G+S  ++  L  L  G   I 
Sbjct: 852  TRARFATWVGTAALDNWQQ-------SGLGYLIG---SEGQSR-ISDCLGKLAEGRAEIR 900

Query: 889  YAQVPEAQPIVFHPPRNEATLRAPLLPKRKAAENWWIASYSALRIG--DSMSAATLEAPE 946
               +P+     +H P  EA L   ++  R+A E+WWIASYS++          A     E
Sbjct: 901  ITPLPDPDDTHYHGPAPEA-LGPAMVSSREAREDWWIASYSSIEYTGMTGTGIAFTGEVE 959

Query: 947  SPQAQKLFDDERLDPDAPREVAASGGDIHRFPRGPNPGTFLHGLLEWAGEEGFN---VTP 1003
              Q Q L ++  LD +      A+  + H FP+G  PGTFLH LLEW  ++GF      P
Sbjct: 960  DAQTQNLLEESTLDEEENPAQMANQRNQHNFPKGAGPGTFLHELLEWCTQQGFQRVVDNP 1019

Query: 1004 EAIEKAVGARCNRRNWEGWIITLSGWLGHLLQTPLPVDNG---HVSLNGLQQYQIEMEFW 1060
              + + +  RC  R W  W+  L  WL  L+  PL +D      V L+ L   + E+EFW
Sbjct: 1020 PLLHEQLTRRCGTRGWNEWVEPLVRWLLALISKPLSLDRAGAETVCLSDLTTLRPELEFW 1079

Query: 1061 FASHKVDVLALDKLVCQYTHSGVSRVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNW 1120
            F S  V +  LD+LV  +T +   R   E    NGM KGFIDL FEH+GRYYV DYKSN 
Sbjct: 1080 FESRNVSIRKLDELVTAHTLNRADRPRVEETRFNGMLKGFIDLVFEHNGRYYVLDYKSNT 1139

Query: 1121 LGPDDSAYTQDAMEQSILEHRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYLFLRG 1180
            LG D+SAYT  AM  +IL+ RYDLQYVLYLLALHR LKARLPDYDYDRH+GGA+YLFLRG
Sbjct: 1140 LGEDNSAYTDQAMGNAILDKRYDLQYVLYLLALHRLLKARLPDYDYDRHIGGAVYLFLRG 1199

Query: 1181 TRSASQGAYFTRPPRDLIEGLDLLFQGKTL 1210
              S++ GA+  +PPR LIE LD LF G+++
Sbjct: 1200 IDSSTGGAFTDKPPRALIEQLDALFDGESV 1229