Pairwise Alignments

Query, 701 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas fluorescens SBW25

Subject, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  391 bits (1005), Expect = e-113
 Identities = 287/721 (39%), Positives = 394/721 (54%), Gaps = 80/721 (11%)

Query: 22  QLLERWVDRGWLRALDKAFVGFLHE---LDPH----ADPLVLLAAALTSHQLGHGHVCLD 74
           ++ +R + +G LR LD  F  F+ +   L  H    ++ L +L+AAL++ +LG GH+CL 
Sbjct: 7   EVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSA-ELGRGHICLP 65

Query: 75  LFETL-KAPDFA--LSLPPEGDLQTGAM--------LLPSQLLEGLDGA----------- 112
           L +      D A  + L  E  LQ            LL +  L G  G            
Sbjct: 66  LCDAQGNRCDLAALIGLYGEASLQHSERWLAVDWQALLQASPLVGQQGEAVPLMFDGSRL 125

Query: 113 ------HWCHALAASHLVALAVDGSESAQSRPLVLSGKRLYLRRY---WT--YERRIDTA 161
                 H+   LAA      A      A+   L      L+ R Y   W    ++ + + 
Sbjct: 126 YLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQKPLSSV 185

Query: 162 LRL-----RLATQERVAADLP---------QR---LDSLFDQPPPDGVIDWQKLACALAT 204
            R+     RL   E  A D P         QR   L +L    P    ++WQK+A A+A 
Sbjct: 186 ERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVAAAVAL 245

Query: 205 RGAFSIVTGGPGTGKTTTVVRLLALLQAPSVESGSPLRIRLAAPTGKAAARLTESISQQV 264
              F++++GGPGTGKTTTV +LLA L + S+  G    I+L APTGKAAARLTES+ + V
Sbjct: 246 TRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTESMGKAV 305

Query: 265 LSLKVPDNVKEKIPTQVTTVHRLLGSRPGTRHFRHHIGNPLPLDVLVVDEASMIDLEMMA 324
             L +   +   IP+  +T+HRLLG+ PG+  FRHH  NPL LD+LVVDEASM+DL +M 
Sbjct: 306 SQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVDLPLMV 365

Query: 325 NLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGFYSAETRRWLQAVSGEDLSA 384
            L++ALP HARL+LLGDKDQLASVEAGAVLGD+C     G Y  E    L  ++G    A
Sbjct: 366 KLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQG-YGHEQGAQLAELTG---FA 421

Query: 385 SGLQEDLDGTHPLAQQVVMLRYSRRFGEGSGIGQLARWVNQQNAEEARKLLAARSHDDLF 444
           +  Q      +P+A  + ML+ S RF   SGIGQLA+ +N  +     + +  +S  D+ 
Sbjct: 422 TLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARV-EAVWQQSFSDIE 480

Query: 445 CVSLKGEH-DYALERLVLDGQGDGAEGYRYYLNLLQSARPSADTPREDTAWTHWAQQLLQ 503
             +L GEH    L+ LV        + YR YL+LL   +P+        +    A+  L 
Sbjct: 481 HFALSGEHYQQLLQTLV--------QAYRPYLSLLN--QPTEQFESTQQSMLTLAKSALD 530

Query: 504 AFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEGDEQ-WYEGRPVLMTRNDYGLGLM 562
           AF   +LLCA+R+G +GV GLN RI  AL   +LI+  E+ WY GRP+++TRND+GLGL 
Sbjct: 531 AFSRCRLLCALREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHGLGLY 590

Query: 563 NGDIGIALKLPESDGGPPVLRVAFPRNDGQGGVRFVLPSRLNDVETVYAMTVHKSQGSEF 622
           NGDIG+ ++  + D G   L+V F   D  G ++ VLPSR+   ET YAMT+HKSQGSEF
Sbjct: 591 NGDIGLCMRDRDDDQGR--LKVYFELPD--GSIKAVLPSRVPQHETAYAMTIHKSQGSEF 646

Query: 623 THTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRGGVFEEAVRRKVKRLSGLMLELG 682
             T LILP   +P+LT+EL+YTGITRAK+   L      V + A++ K +R SGL+  L 
Sbjct: 647 DLTLLILPPDYSPILTRELVYTGITRAKKQLKLY-CDNKVLQRAIKVKTQRASGLVARLE 705

Query: 683 Q 683
           Q
Sbjct: 706 Q 706