Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

Subject, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  445 bits (1145), Expect = e-129
 Identities = 279/654 (42%), Positives = 393/654 (60%), Gaps = 32/654 (4%)

Query: 5   FGNISVNLKLGLGFGLVLVLTSILALTGWTSLGGLIDRSNWMSDITQLNASLTKLRIVRL 64
           F N+SV  KL  GFGLVL+LT  +A TG+ ++  ++ R+  +  ++ +NAS+   R    
Sbjct: 8   FTNLSVGKKLICGFGLVLLLTLGVAGTGFVAVDEILGRAQQIEQLSSVNASILAARGAER 67

Query: 65  QYMLANGDEAVAQNVQTSLDAFAAQQQKL------LDSFKSPENLKLLNEQKGVITAYQQ 118
            + L           Q+S DA  +  Q+L      LD+  S      L   +     Y +
Sbjct: 68  DFALTRQ--------QSSADALHSSLQQLNTELAGLDASSSAAERAYLTRIRQAAEEYGR 119

Query: 119 SLNKMREAYRNGNASRQVMGDKADIANAQIEALDTK----VQQMPESPERFSQFQAVTRA 174
             ++  +    G A R  M D A ++  + E ++      V+ +    +R      +T A
Sbjct: 120 QFDRYMQLIERGVALRTRMQDAAQVSREEFEFIELDMYDAVRVLRLEGDRLKGSDPLTIA 179

Query: 175 K------EEFMLARYEVRGYIANVSPDTEARAAAQIEKAISGL-KGLSAVFGASEQSALT 227
           +      ++ +  R +   ++AN S D  A++  ++   ++ +   L       +Q+++ 
Sbjct: 180 EATSGLTKQILDMRTQENVFVAN-SSDAAAKSWGELHGNVTAIGSNLKVWLNDDQQASMD 238

Query: 228 ALETALGAYRTAVQNYKAANANIVTARAEMTTQGADIVTISDKLYEIQLNRRDAESAQAR 287
                L  YR A   ++      +     M  Q   ++  +D   E   N  +A   Q R
Sbjct: 239 KALAELEQYRAAFDEFRQNRGERLELERSMAQQSEVVIAAAD---EALANASNAMQQQQR 295

Query: 288 SLQLISTL---LALLVGVIAAWVITRQITRPIQETLAVVERIASGDLSHNIQVTRRDELG 344
           S  L+  +   LA+ VG++AA VI+R I  P++ T+   +R+A+GDL+H+    RRDE+G
Sbjct: 296 SSYLLLGVIGALAIFVGLLAATVISRMIVGPLRSTVQQAQRVANGDLTHSEASARRDEVG 355

Query: 345 VLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMH 404
            LQ  +  M  +LR LI  I  GV+QIA+AA++LSAVT QTSAGV +Q++ET+QVATAMH
Sbjct: 356 QLQNAMHGMTQSLRNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQRVETEQVATAMH 415

Query: 405 EMTATVQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQ 464
           EM ATVQEVARNAEQAS+AA  AD QAR GD+VV +A+ QI  LA+EV +S  A+  L  
Sbjct: 416 EMAATVQEVARNAEQASIAARQADQQARQGDRVVQDAVGQIGNLASEVDQSAHAIEALHA 475

Query: 465 ESNKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEE 524
           ES +IGSV++VI+AVAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT  STEE
Sbjct: 476 ESGRIGSVLEVIRAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTHDSTEE 535

Query: 525 IEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAA 584
           IEGL+A LQ   QQ    M +SRSLT  +V+L  +AGV+L  IT +VS I+ MNQQIAAA
Sbjct: 536 IEGLIANLQRVAQQAVEQMQSSRSLTQRTVDLANEAGVALGRITESVSTIEQMNQQIAAA 595

Query: 585 AEQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFR 638
           AEQQSAVAE IS S+  VRD+ +Q+A+A+++TA +S ELARLG +LQ +V  FR
Sbjct: 596 AEQQSAVAENISESVTRVRDIGDQSASATEQTAGASAELARLGVELQGLVRQFR 649