Pairwise Alignments

Query, 596 a.a., DUF1302 domain-containing protein from Pseudomonas fluorescens SBW25

Subject, 680 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  303 bits (775), Expect = 2e-86
 Identities = 218/673 (32%), Positives = 340/673 (50%), Gaps = 102/673 (15%)

Query: 15  LAAAVALGCCAQAQAVSFNIGEIEGQFDSSLSVGASWGMRDAD-KKLVGTVN-------- 65
           +A+A++L   +   AV+F+ G ++G FDS+ + GASW + + D    +G VN        
Sbjct: 17  VASALSLLMVSNVNAVAFDWGAVQGSFDSTWTAGASWRVGERDWAGQIGKVNQPQFDWSN 76

Query: 66  ----GGT------------GQASTGDDGRLNFKKGETFSKIFKGLHDLELKYGDTGVFVR 109
               G T              +S  D   L + +G+T S+I KGLH+L LKY + G+F R
Sbjct: 77  YTAFGNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKGLHELSLKYENYGLFAR 136

Query: 110 GKYWYDFELQDEDREFK-PISNH-------NRKEGAKSSGAQILDAFVYHNYSLGD--LP 159
           G Y+YD +L D + +F  P++         NR    +    ++LDAFVY N+ L D   P
Sbjct: 137 GMYFYDRKLNDGNYDFNDPLTGKEYDPCQDNRASEVQCKDIRLLDAFVYANFDLNDGANP 196

Query: 160 GTVRVGKQVVSWGESTFIGNSINSINPIDVSAFRRPGAEIKEGLIPVNMLFASQSLTNQL 219
            ++RVG QVVSWGEST I + I  INP+D++    PGAE+KE   P  M++AS  +T  L
Sbjct: 197 LSIRVGNQVVSWGESTLIAHGIGEINPVDLNILNAPGAELKEAFRPQGMVWASLGITENL 256

Query: 220 TLEGFYQLEWDQTVLDNCGTFFG-GDVAADGCTN-NYTVG---NPAI------RPLQPVA 268
           ++E FYQ +W+   +   G+ F   D A  G  N N  +G   NP I      +  Q +A
Sbjct: 257 SVEAFYQYDWEPIWVPTPGSIFATNDFAGFGGYNQNAQLGFNANPDINLDFVMQEYQRLA 316

Query: 269 AAFGQGFGVTNEGVIVRRAG----------DRDARDSGQFGTALRWLG---DDTEYGLYF 315
                G  +  + ++               ++   + GQ+G  L +      DTE+G YF
Sbjct: 317 GMIASGQTIPTQQLVAMALAYPTKVTLVQDEQSPSNDGQYGIKLGYYAPELGDTEFGFYF 376

Query: 316 MNYHSRTPTV-GTITNNTSLATLGAISGAANGIAPGSGAG-LVQSLMLGRGQY---YLDY 370
           MNYHSR P + GT  + ++ A L  ++        G  AG + + L+L    +    + Y
Sbjct: 377 MNYHSRRPLISGTAADFSTGALLSDLA------VLGQNAGDINRDLLLSLKSFSKAQIVY 430

Query: 371 PEDIRLFGASFSTTLPTGTAWTGEISYRPNAPVQLNTTDLTLALINPVAGQAASPIRSNF 430
           PEDI+L+G SF+T+L   T+   EI++R + P+Q++  +L  A +      A   IR +F
Sbjct: 431 PEDIKLYGFSFNTSL-GDTSVGAEIAHRQDEPLQIDDVELLFAGMPQQLANAG--IRPDF 487

Query: 431 -----------GDDNKGYRRKEITQIQSTMTQFFDQVLGAERLTLVGEAAVVHVAGLEDK 479
                      GD   G+ R++ TQ Q+T T  F   LG + LT++ E   V +  +   
Sbjct: 488 NGISQIDGVKPGDTVDGFIRRDTTQAQATFTHLFGPTLGLDNLTMLAEVGGVWIHDMPGF 547

Query: 480 SKLRYG------------RDSVYGAYGFQGDTDGFVTSTSWGYRARAILDYNNAIAGVNL 527
            +LR                 +  A     +T+ F T  +WGYR  A  ++NN  AGVN+
Sbjct: 548 DELRLNGPGTARSGGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKAEFNNLFAGVNM 607

Query: 528 KPNLSWSHDVAGYGPNG--LFNKGAKAISVGVDADYRNTYTASLSYTDFFG--GDYNTLT 583
            P + +SHDV G  P+   LF +G K++++G++ +Y+N + A LSY +FFG  G  N + 
Sbjct: 608 SPRMIFSHDVDGITPDPMFLFTEGRKSVALGLNFEYQNRWGADLSYNNFFGGVGTTNAMA 667

Query: 584 DRDFLALSFGVNF 596
           DRD+  +SF + +
Sbjct: 668 DRDY--ISFNIKY 678