Pairwise Alignments

Query, 514 a.a., nitric oxide reductase transcriptional regulator NorR from Pseudomonas fluorescens SBW25

Subject, 509 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Pseudomonas stutzeri RCH2

 Score =  473 bits (1218), Expect = e-138
 Identities = 262/509 (51%), Positives = 335/509 (65%), Gaps = 13/509 (2%)

Query: 13  LVADLSRELPEGERYRRLLQAMRALLPCDAAALLRLDGDSLVPLAVDGLSADTLGRRFKV 72
           L+ADL+ ELP   R +RL+  ++    C A  LLRLD DSL PLA  GL  + LGRRF +
Sbjct: 7   LLADLTTELPNAVRLQRLVHTLQQRFRCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVI 66

Query: 73  SEHPRFAVLLSSPGPTRFDSDSELPDPYDGLVDGLHGH-LEVHDCMGCPLFVDDHPWGLL 131
           ++HPR A +LS   PT F+ DS LPDPYDGL+D   G  L VHDCMG  L+V+   WG L
Sbjct: 67  AQHPRLAAILSQREPTWFEPDSRLPDPYDGLLDAHIGEPLPVHDCMGVSLYVEGKLWGAL 126

Query: 132 TLDALDTERFERVELDALQAFASLAAATVNVAE-RIERLALRAEDEHQRAEIYRQASGQQ 190
           TLDAL    F+      LQ +  +  A V V     E   LR      R+++        
Sbjct: 127 TLDALHAGTFDDDARRDLQRYTLVIEAAVRVTRLEHENRGLRLA----RSDVMETTLDHG 182

Query: 191 HKEMIGQSKTHKRLVEEIKWVGGSDLTVLITGETGVGKELVAQAIHAASHRADKPLISLN 250
             E++GQS   + L+ E++ V  S+L VL+ GETGVGKEL A+ +H  S R +KPL+ +N
Sbjct: 183 DGEILGQSDVIRELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVN 242

Query: 251 CAALPETLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLTVQAKLLRVL 310
           CAALPE+L ESELFGHV+GAF+GA  +R G+F+ ANGGTL LDEVGEL LTVQAKLLR L
Sbjct: 243 CAALPESLAESELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTL 302

Query: 311 QSGQLQRLGSDKEHQVDVRLIAATNRDLADEVRNGRYRADFYHRLSVYPLQVPALRERGR 370
           Q+G++QRLG+DK  QVDVR+IAATNR+L + VR+G +RAD YHRLSVYP  +P LRERG 
Sbjct: 303 QNGEIQRLGADKPRQVDVRIIAATNRNLRESVRDGHFRADLYHRLSVYPAPIPPLRERGN 362

Query: 371 DVLLLAGFFLEQNRSRMGLGSLRLTSDAQAALLAYNWPGNVRELEHLIGRSALKALGNCR 430
           DVL+LAG FLE NR+R+GL S+RL+  A+ ALL Y+WPGNVRELEH++ R+AL+ L    
Sbjct: 363 DVLILAGHFLELNRARLGLRSMRLSPAAERALLGYSWPGNVRELEHVVSRAALRLLSRGA 422

Query: 431 ERPKILSLSAQDLDLPD-----VSAPVVEAPVDTGLAVTGDLRQATEHYQRQVISACLER 485
            R +IL+L    LDL        ++ VVE PV     +   LR   +  QRQ I   LE 
Sbjct: 423 SRSEILTLEPDLLDLDSHAVGVTASQVVEEPVIADEVL--PLRHTVDAAQRQAIVRALEA 480

Query: 486 HQHNWASAARELGLDRANLGRMAKRLGMK 514
              NWA AAR L +D +NL ++A+RL +K
Sbjct: 481 SGENWAQAARLLDVDPSNLHKLARRLKLK 509