Pairwise Alignments

Query, 179 a.a., purine-binding chemotaxis protein CheW from Pseudomonas fluorescens SBW25

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (258), Expect = 1e-27
 Identities = 57/163 (34%), Positives = 98/163 (60%), Gaps = 8/163 (4%)

Query: 6   TTRQTAVAVDED---AQYLTFMLGGEMFAIGILGIKEIIEYGSLTVVPMMPAFVRGVINL 62
           T    AVA  +D    Q++TF L  E + I ++ ++E++ Y  +  VP  P +V G+INL
Sbjct: 4   TRNVAAVAASKDDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINL 63

Query: 63  RGAVVPVVDLSARFGRANSAITRRSCVIIIEASTEDGQPQDIGLLVDTVSAVQEIPATQI 122
           RG VV V+D  +RFG  ++ +   + ++IIEA     + Q IG+LVD+V+ V  +  ++I
Sbjct: 64  RGNVVTVIDTRSRFGLQSAEVDDSTRIVIIEA-----EKQVIGILVDSVAEVVYLRRSEI 118

Query: 123 EPPPSFGARIRADFISGMAKVDGKFVIVLEVDKVLSIDEMSSL 165
           +  P+ G    A FI G++  D + +I++++DK+LS +E + L
Sbjct: 119 DNAPNVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEEWAEL 161