Pairwise Alignments

Query, 179 a.a., purine-binding chemotaxis protein CheW from Pseudomonas fluorescens SBW25

Subject, 170 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.0 bits (245), Expect = 4e-26
 Identities = 49/147 (33%), Positives = 89/147 (60%), Gaps = 5/147 (3%)

Query: 16  EDAQYLTFMLGGEMFAIGILGIKEIIEYGSLTVVPMMPAFVRGVINLRGAVVPVVDLSAR 75
           ++ ++L+F+LG E +A+ I+ +KEI  Y  +T +   P+F++GV+NLRG +VP+VDL  +
Sbjct: 17  DEVEFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRMK 76

Query: 76  FGRANSAITRRSCVIIIEASTEDGQPQDIGLLVDTVSAVQEIPATQIEPPPSFGARIRAD 135
           F          + VI++         + +G++VD VS V ++ +  I P P FGA   + 
Sbjct: 77  FNVGTVTYDEFTIVIMLNVC-----DRIVGIVVDAVSDVIKLSSEAILPAPEFGAAFDSR 131

Query: 136 FISGMAKVDGKFVIVLEVDKVLSIDEM 162
           ++ G+A VD K VI++ +  ++S D++
Sbjct: 132 YLKGLATVDEKMVILVNIQALISSDDL 158



 Score = 21.6 bits (44), Expect = 0.008
 Identities = 9/47 (19%), Positives = 23/47 (48%)

Query: 122 IEPPPSFGARIRADFISGMAKVDGKFVIVLEVDKVLSIDEMSSLAEA 168
           + P P F A    +F+S +   +   + ++ V ++   + ++ +A A
Sbjct: 7   LAPKPEFSAHDEVEFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANA 53