Pairwise Alignments

Query, 382 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Pseudomonas fluorescens SBW25

Subject, 364 a.a., radical SAM enzyme, Cfr family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  253 bits (645), Expect = 8e-72
 Identities = 144/355 (40%), Positives = 207/355 (58%), Gaps = 11/355 (3%)

Query: 8   TNLLGLTQPEMEKFFDS-IGEKRFRAGQVMKWIHHFGVDDFDAMTNVSKALRDKLKAIAE 66
           T++L LT  E+E F  + +GE RFRA QV +W+       FD MTNVSKA R +L   A 
Sbjct: 2   TDILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKAV 61

Query: 67  VRGPEVVSEDISSDGTRKWVVRVASGSCVETVYIPQGKR-GTL----CVSSQAGCALDCS 121
           +  PEV +   S+DGT K+++R+A G+ VETV IP   R GTL    C+S Q GCA+ C+
Sbjct: 62  ITWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCT 121

Query: 122 FCSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAI-TNVVMMGMGEPLLNFDNVI 180
           FCSTG  GF  N+T  E++GQV +A    G   +  D  I  N+V MGMGEPLLN + V+
Sbjct: 122 FCSTGTMGFERNMTMGEILGQVLVARAHLGD--SRPDHPILRNLVFMGMGEPLLNLNEVM 179

Query: 181 AAMHLMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDALRNQLVPIN 240
            ++  + D+ G   S RR+T+ST G+   + EL +     LA+SLHAPN  +R +++P  
Sbjct: 180 RSLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEIRKRIMPKA 239

Query: 241 KKYPLKMLLESCQRYMATLGEKRVLTIEYTMLKDINDKVEHAVEMIELLKNTPCKINLIP 300
             + L  L+ + + Y     E+  +T EY +L  +ND +EHA E++ L+  T  K+NLI 
Sbjct: 240 AHWHLDDLITALESYPLKTRER--VTFEYLLLGGVNDGIEHARELVRLVSRTKGKLNLIV 297

Query: 301 FNPFPHSGYERPSNNAIRRFQDQLHQAGYNVTVRTTRGEDIDAACGQLVGQVMDR 355
           +NP     Y+ P+   I  F+  L        +R ++G+DI AACGQL    + R
Sbjct: 298 YNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLKASELQR 352