Pairwise Alignments

Query, 459 a.a., exodeoxyribonuclease VII large subunit from Pseudomonas fluorescens SBW25

Subject, 442 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella loihica PV-4

 Score =  354 bits (909), Expect = e-102
 Identities = 203/436 (46%), Positives = 268/436 (61%), Gaps = 7/436 (1%)

Query: 15  ILTVSQLNGRARVLLEDVFTNIWVEGEISNLARPASGHVYFTLKDSGAQVRCALF--RNN 72
           + TVS+LNG  R LLE     +W+E EISN + P+SGH Y TLKD+ AQ+R A+F  RN 
Sbjct: 8   VYTVSRLNGEVRQLLEGELGKVWLEAEISNFSAPSSGHWYLTLKDNYAQIRAAMFKGRNR 67

Query: 73  AARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFDALKEKLSAEGL 132
           A   R A  +G  V V+G +S++E RGDYQLI+D++ PAGDG L   ++ALK KL+AEGL
Sbjct: 68  AVTFRPA--NGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKLAAEGL 125

Query: 133 FSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPTAVQGREAIPQIV 192
           F+A+ K PLP++ +RIG+++S TGA IRD++ V +RR P+IE+ + P+ VQG  A   + 
Sbjct: 126 FAADTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADKSLC 185

Query: 193 RALKLA-DARGFDALILARGGGSLEDLWCFNEEAVARAVDACITPIVSAVGHETDVSISD 251
            A+  A D    D L+L RGGGSLEDLWCFN EA+A  +     P+VSAVGHE D +ISD
Sbjct: 186 HAIMQANDRMEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTTISD 245

Query: 252 FVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRLSHDRLRLEGMARRL--R 309
           +VAD+RAPTPSAAAELL+ DA     ++     RL    ++       R   +  RL  +
Sbjct: 246 YVADLRAPTPSAAAELLSQDALSKADKLRMTMTRLKQGWQHYGLKQAQRFSQLHHRLERQ 305

Query: 310 HPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHPGRQLALLRQRLES 369
            P  RL+Q  QR D+L +RL  A    L+    R   L  RL    P  QLAL   RL  
Sbjct: 306 DPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLALAASRLTH 365

Query: 370 LAERLPRAMREGLKARRLQLQSQVQTLHVVSPLATLGRGYSILLDERGQAIRTAAQTHTG 429
             +RL  AM+  L +    LQ     L  VSPLATL RGYSI LD  G+ + +A    TG
Sbjct: 366 QNQRLHSAMQARLNSAEKSLQYAAHQLETVSPLATLSRGYSITLDTEGKVLHSAQDVRTG 425

Query: 430 QRLTARLGEGQLQVRV 445
            RLT +L +G++Q  V
Sbjct: 426 ARLTTKLVDGEVQSTV 441