Pairwise Alignments

Query, 167 a.a., L,D-transpeptidase family protein from Pseudomonas fluorescens SBW25

Subject, 171 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  143 bits (361), Expect = 1e-39
 Identities = 68/160 (42%), Positives = 97/160 (60%)

Query: 8   ICLSFVTLSSASTVETLGGKTVEKVLVLKSAHQLQLINDGKPFKTYRISLGKNPKGHKLI 67
           + ++   L S   + + G   V+ V++ KS   + L+ DGK  K YRI++G  P GHKL 
Sbjct: 12  VAITLAALISPQVLASSGIGKVDLVVITKSESNMALLRDGKVLKQYRIAMGDLPTGHKLT 71

Query: 68  EGDRRTPEGLYWIDWRKTSERFNLAMHISYPNISDAARARREGVKPGSMIMIHGTPDTED 127
           EGD+RTP+G Y +D++K+   +  ++HISYPN  D  RA+  G++PG MIMIHG      
Sbjct: 72  EGDQRTPQGRYILDYKKSDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSP 131

Query: 128 YPEQWFHTLDWTDGCIGMRNVDMREVWTLVKDGTLIEIRP 167
            P +     +WTDGCI + N +M EVW  V +GT IEI P
Sbjct: 132 LPPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGTPIEIWP 171