Pairwise Alignments

Query, 486 a.a., D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase from Pseudomonas fluorescens SBW25

Subject, 543 a.a., D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (280), Expect = 3e-29
 Identities = 105/379 (27%), Positives = 166/379 (43%), Gaps = 11/379 (2%)

Query: 65  NADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYTDGTLSGGVLHGNLYLKGGGDPKLN 124
           NAD  V PAST KL+T  AA+ +LG    + T+F T G LS GVL G+LYL   GDP L 
Sbjct: 106 NADTLVLPASTQKLLTAVAAMRVLGEEFSFATQFSTKGRLSHGVLTGDLYLSFSGDPTLT 165

Query: 125 MEKLWLLMRDLRANGVQQVTGDLVLDRSFFNQPLLPEFNDDGNDENKPFLVKPDALLVNL 184
            + L  +++ L+  G+  V G+L+L      Q   P +  D  D    +     + +VN 
Sbjct: 166 TDDLRAMLKSLKDAGIHTVKGNLLLVGQAKEQTRAPGWVWD--DLGICYAAPVSSFIVNQ 223

Query: 185 KALRFVTRNDSGRVLVSVE-PPIASIRIDNQVKVSNAKQCTGDVRYNPVTAADGSVTVTV 243
             ++   +         +  P    I++ +   V +  Q       N     D      +
Sbjct: 224 NCVKGQLKPKLASSASQLNFPRYLPIKV-STTAVFDKTQQEPFCELNLARLPDNH--YHI 280

Query: 244 SGQLADGCSSQTYLSLLDHATYTAGAVRAIWKELGGTIQGR-DIQAPVPKDAKVLARAFS 302
           SG           +++ D A Y    +  + K     + G+  I    P   K L    S
Sbjct: 281 SGCYPGDKPLNLAIAVDDPALYAKEMLTRMLKSAHIKMSGQVAIAHRTPIGLKPLVTHKS 340

Query: 303 PDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNDADGDDAKAAQRVVRQWLAKKGITAPHL 362
             L  ++R +   S+N +A  LF ++GA +   A+   A A  R V+  L   GI   H 
Sbjct: 341 EGLEALLRTMLLDSDNLIADSLFKAVGAHYYKVAENFHAGA--RAVKAILEADGIDLSHS 398

Query: 363 VMENGSGLSRAERVSAREMAAMLQAAWKSPYAAEYISSMPIAGTDGTM--RKRLKTTAMR 420
            + +GSGLSR   +SAR++A +L    K       I  +P+AG  GT+  ++      + 
Sbjct: 399 QIIDGSGLSRYNLISARQLAEVLGLMAKDEKLRPLIELLPVAGVSGTLNYKRGFHQAPLM 458

Query: 421 GEAHVKTGTLNTVRAIAGF 439
            +   KTG++  V  +AG+
Sbjct: 459 NKVSAKTGSMQGVDNLAGY 477