Pairwise Alignments

Query, 255 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas fluorescens SBW25

Subject, 242 a.a., N-acetyl-anhydromuramyl-L-alanine amidase from Caulobacter crescentus NA1000

 Score =  115 bits (287), Expect = 1e-30
 Identities = 89/249 (35%), Positives = 119/249 (47%), Gaps = 30/249 (12%)

Query: 9   PAKGFNERNGEPVRQVILHYTAAPFGSSLRTLTQDG---VSAHYLLPDPDEPSYRAAGYE 65
           P+  F+ R   P   VILHYT    G +     +D    VSAHY +             E
Sbjct: 9   PSPNFDARKAVP-DTVILHYTGMETGEAAIERLRDPEAKVSAHYCVE------------E 55

Query: 66  ELRVFRLVEEGKRAWHAGVSHWAGRDNLNSRSIGIEIVNLARDDGGVFTFPAYGEEQIEV 125
           + R+ RLV E +RAWHAG + W G  ++NS S+GIEIVN     G  F +  + E QI  
Sbjct: 56  DGRIVRLVAEERRAWHAGAAFWKGVKDINSASVGIEIVN----PGHEFGYRPFPEAQIAA 111

Query: 126 LIALVCDVLGRYPQIGPTDILGHSDVAYGRKSDPGPRLPWRCLHEAGVGAWFDEAT---R 182
           +I L+ D+  R+  I  + ILGHSDVA  RK DPG   PW+ L E+G G W + A     
Sbjct: 112 VINLLADIRSRW-MIPDSRILGHSDVAPARKIDPGELFPWKRLAESGHGLWIEPAPSPGA 170

Query: 183 AMYQRRFCLGLPPEVEVERAFQRYGYAPAKNRQAFEQR---TRAFQMHFRPRDYCGFLDA 239
            + Q     G+     ++    R GY  A + +  E       AFQ H+    + G  D 
Sbjct: 171 PLGQGEEGTGV---FALQAGLTRLGYDCAPSGKYDEWTATVVSAFQRHWLQSRFDGIADG 227

Query: 240 ETCAILYAL 248
           ET A L  L
Sbjct: 228 ETRARLVGL 236