Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Pseudomonas fluorescens SBW25

Subject, 985 a.a., excinuclease ABC subunit B from Sinorhizobium meliloti 1021

 Score =  790 bits (2039), Expect = 0.0
 Identities = 401/663 (60%), Positives = 501/663 (75%), Gaps = 5/663 (0%)

Query: 10  FEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVLAPNKTLA 69
           +EPAGDQP AI  +V+G+ +G  +Q LLGVTGSGKTF++A VI    RP ++LAPNKTLA
Sbjct: 164 YEPAGDQPTAIADLVDGLTSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLA 223

Query: 70  AQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRLSATKAL 129
           AQLY EFK FFP+NAVEYFVSYYDYYQPEAYVP SDT+IEK++SIN+ I++MR SAT++L
Sbjct: 224 AQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSL 283

Query: 130 LERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYTRNDMDFAR 189
           LER D IIV +VSCIYG+GS ETY  M   +  GD+LDQR+LL  L + QY R DMDF R
Sbjct: 284 LERDDVIIVASVSCIYGIGSVETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRDMDFQR 343

Query: 190 ATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTFYPKSHYV 249
            +FRVRGD I+I+PA  +  A RI +F DE++S++ FDPLTG+    L     Y  SHYV
Sbjct: 344 GSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLKSVKIYANSHYV 403

Query: 250 TPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYCNGIENYS 309
           TPR TL  AI+ IK E+++RL  L    +L+EAQRLEQRTR+D+EM+   G C GIENYS
Sbjct: 404 TPRPTLNAAIKAIKEEMSQRLAELERAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYS 463

Query: 310 RYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVEYGFRLPS 369
           RYL+GR  G PPPTL++Y+P +AL+ IDESHV++PQ+G MY+GD  RK TL EYGFRLPS
Sbjct: 464 RYLTGRRPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPS 523

Query: 370 ALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVI-EQLVRPTGLVDPEIEIRPALT 428
            +DNRP+RF+EW+A+ P TI VSATPG +E E AG V  EQ++RPTGL+DP +E+R A T
Sbjct: 524 CMDNRPLRFEEWDAMRPDTIAVSATPGAWEMEQAGGVFAEQVIRPTGLIDPPVEVRSAKT 583

Query: 429 QVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDTVERVEIIR 488
           QVDD+L EI +  A   R LVT LTKRM+EDLT+YL + GVRVRY+HSDIDT+ER+EIIR
Sbjct: 584 QVDDVLGEIRETAAAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIR 643

Query: 489 DLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRA 548
           DLRLG FDVLVGINLLREGLD+PE   VAILDADKEGFLRSE SLIQTIGRAARN++G+ 
Sbjct: 644 DLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKV 703

Query: 549 ILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATVPGSRSKKR 608
           ILYAD ITGSM+RA+ ET RRR+KQ+A+N E+GITP+ V   ++DI++       R   R
Sbjct: 704 ILYADTITGSMQRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVY---ERDHVR 760

Query: 609 KGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDEIGKLRERL 668
             ++  A +       L   + +   +  LE++M   A DL+FE AA+ RDEI +L+   
Sbjct: 761 ADISGVAGKGFADGGHLVG-NNLQAHLNALEKQMRDAAADLDFEKAARLRDEIKRLKAAE 819

Query: 669 LAV 671
           LAV
Sbjct: 820 LAV 822