Pairwise Alignments

Query, 305 a.a., ribokinase from Pseudomonas fluorescens SBW25

Subject, 304 a.a., ribokinase (RefSeq) from Shewanella loihica PV-4

 Score =  217 bits (553), Expect = 2e-61
 Identities = 133/300 (44%), Positives = 180/300 (60%), Gaps = 5/300 (1%)

Query: 4   KVVVVGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARLGAD---VSMIG 60
           +++++GS N D V     LP AG+TL+ + +    GGKGANQAVA+ARL  D   V  I 
Sbjct: 3   RLLILGSANADHVMNLEHLPSAGQTLMSRGYRLEHGGKGANQAVAAARLSKDETRVDFIC 62

Query: 61  CVGTDAYGTQLRDALQVEGIDCQAVS-TVDGSSGVALIVVDDSSQNAIVIVAGSNGELTP 119
            +G DA G  +  A Q +GI    ++ T D  +G A+I V D  +N I + AG+N  LTP
Sbjct: 63  HLGRDAIGQAMAQAWQQDGIMPYGITYTDDQPTGTAMIFVADKGENIIGVSAGANATLTP 122

Query: 120 ASLQAFDAVLQAADVIVCQLEVPMKTVGYALKRGRELGKTVILNPAPASAPLPAEWYASI 179
            +L+A   +++ AD ++ QLE P  TV  ALK  ++ G T ILNPAPA   +  + +  +
Sbjct: 123 EALEAHLELIEKADYLLVQLETPAVTVLDALKHAKKHGVTTILNPAPAMV-IGKDLFRLV 181

Query: 180 DYLIPNESEATALSGVTVDSIDSAKAAATHLIQAGAGKVIITLGAQGALFTDGQGFEHLL 239
           D + PNE+EA A++G+ V    SA+ AA  L Q G   VIITLG QGAL +       + 
Sbjct: 182 DVITPNETEAEAITGIEVTDEQSARMAAQMLHQFGPQTVIITLGKQGALLSTKDYCALIP 241

Query: 240 APKVKAVDTTAAGDTFVGGFAAALANGKSEAEAIRFGQVAAALSVTRAGAQPSIPTLHDV 299
             +VKAVDT AAGDTF G    AL  GKS  EA+ F   AAA+SVTRAGAQ +IP  H++
Sbjct: 242 GVQVKAVDTVAAGDTFNGALMVALGEGKSVEEAVAFAHRAAAISVTRAGAQRAIPYRHEL 301