Pairwise Alignments

Query, 306 a.a., Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB from Pseudomonas fluorescens SBW25

Subject, 382 a.a., periplasmic binding protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 21/270 (7%)

Query: 30  NDGQHAVHLPDAPKRVVVLEFSFLDSLAAVDVTPVGAADDGDANRVLPRVRQAIGQWTSV 89
           +D    V LP   +R+V L  +F + LAA+D+T     D   A         AI     +
Sbjct: 101 DDTGREVRLPHPARRIVALYGAFNELLAAMDMT-----DRVAARTAADEEPAAIRSLPVI 155

Query: 90  GLRSQPSIEEIARLKPDLIVADLNRHQA-----LYNDLSSIAPTLLLPSRGEDYEGSLKS 144
           G   +PS E +A + PDL++    R +A         L        + S GE + G+L+ 
Sbjct: 156 GTHMRPSPEMVAAVAPDLVLQMEGRREAGEAVEGLRALGIPVAVFRVGSFGELF-GALRR 214

Query: 145 AELIGKALGKSPQMTARIAQNRENLKNIAQQI-PAGASVLFGVAREDSFSVHGPDSYAGS 203
              +G   G+  + TA  A  R  L  +A ++       +F   R  +    G DS    
Sbjct: 215 ---MGTLTGEPQRATALEAALRTRLDAVAARVADRPRPAVFFEVRYPNLLAAGADSIVTD 271

Query: 204 VL-QAIGLKVPSVRANAAPTEFVSLEQLLALDPGWLLVGHYRRPSIVDSWSKQPLWQVLG 262
           ++  A G    +     A    +S E+LL LDP   L+         +  + +P +  L 
Sbjct: 272 IIAHAGGRNCVTAEGRVAR---LSEEELLRLDPAVYLLQRGPMNPEPEPPATRPHYATLS 328

Query: 263 AVRNQHVAEVDGDSWAR--NRGVLASEQIA 290
           A+RN  V EVD   ++R   R V A E++A
Sbjct: 329 AIRNGRVREVDEARYSRPGPRAVDAVEELA 358