Pairwise Alignments

Query, 160 a.a., sigma-70 family RNA polymerase sigma factor from Pseudomonas fluorescens SBW25

Subject, 166 a.a., Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N1B4

 Score =  118 bits (295), Expect = 5e-32
 Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 2/150 (1%)

Query: 5   YYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERSSDTPIEQPRAFLYRTALNLVIDGHRR 64
           +Y EL+     +L NRQ AED+ HD +VRVLE S    ++QPRA+L++TA N+ +DG+RR
Sbjct: 14  HYEELIGTWTRRLRNRQQAEDLAHDTFVRVLE-SDSAAVQQPRAYLHQTARNIAVDGYRR 72

Query: 65  NALRQVEPLDVLDNEERFAACSPHTTHDHSQRLELLERALAELPPACRDSFLLRKLEGLT 124
              R     + +D+    +    H  H   Q  + +ERAL ELP  CR  F+ +K+EGLT
Sbjct: 73  EDRRGAMESEAIDHSVSSSGDPEHFMHA-IQLADSIERALTELPVNCRKVFVWQKIEGLT 131

Query: 125 HVQIAERLCISRALVEKHIVNAMKHCRVRM 154
             +IAERL +S+ +VEK+++  ++H R R+
Sbjct: 132 QAEIAERLGLSKNMVEKYMIRTLRHLRDRL 161