Pairwise Alignments

Query, 160 a.a., sigma-70 family RNA polymerase sigma factor from Pseudomonas fluorescens SBW25

Subject, 171 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 9   LVCFLNAKLGNRQVAEDVVHDAYVRVLERS-SDTPIEQPRAFLYRTALNLVIDGHRRNAL 67
           LV + +  LG+R  AEDVV +A++R   R+     + QP A+LYR   N  +D  RR + 
Sbjct: 19  LVTYASGILGDRAQAEDVVQEAWLRFAGRAPGGEGVRQPLAYLYRVVRNTAVDCLRRLSA 78

Query: 68  --RQVEPLDVLDNEERFAACSPHTTHDHSQRLELLERALAELPPACRDSFLLRKLEGLTH 125
             R+ E  ++L + +R A  SP         L L+  AL+ELP   R +F L++ EGL+ 
Sbjct: 79  EERRNEAGEILSDPDRQAP-SPEEIALGRDHLRLVAAALSELPERNRRAFELQRFEGLSF 137

Query: 126 VQIAERLCISRALVEKHIVNAMKHCRVRMR 155
            QIA+ L +S A   +   +AM H   R++
Sbjct: 138 QQIAQHLEVSPATAHRLARDAMVHVMGRLQ 167