Pairwise Alignments

Query, 1073 a.a., efflux RND transporter permease subunit from Pseudomonas fluorescens SBW25

Subject, 1066 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  334 bits (857), Expect = 2e-95
 Identities = 302/1098 (27%), Positives = 487/1098 (44%), Gaps = 114/1098 (10%)

Query: 18   LAIFICIIGPMAAL-----RTPTDVFPDIGIPVVAVVWQYNGLSPDAMAGRVIYTYERSL 72
            L + I +IG MAA      +   D FPD+    V V     GL+ + +   + Y  E ++
Sbjct: 14   LIVLIFLIGAMAAAAVMLPKLNLDAFPDVTNVQVQVNTAAEGLAAEEVEKLISYPVESAM 73

Query: 73   STTVNDIEHIESQSLPGMGIVKIFFQPGVDIRTANAQVTAVSQTVLKQMPPGITPPLILN 132
               +  +  + S S  G+ IV + F+ G DI  A  QV    Q   + +P G+  P I  
Sbjct: 74   YA-LPSVTEVRSLSRTGLSIVTVVFEEGTDIYFARQQVFEQLQAAREAIPDGVGVPEIGP 132

Query: 133  YSASTVPILQM---AFSSPSLSEARIRDLVQNNIRLPLSALPGLAMPTPMGGKQRQITLD 189
             ++    + Q    A     ++   +R L    ++L +  + G+      GG+ RQ  + 
Sbjct: 133  NTSGLGQVYQYILRAAPESGIAPDELRSLNDYLVKLIMMPVGGVTDVLSFGGEVRQYQVQ 192

Query: 190  LDPQALAAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTI----LLNNSPKAIDELNDL 245
            +DP  L + GL   DV  AL   N+         G  +  +    LL      +D +  +
Sbjct: 193  VDPAKLLSYGLKLDDVTRALEGNNRNAGGWFMAKGQEQLVVRGYGLLPAGEAGLDAIAQI 252

Query: 246  PIKTVDGALITIGQVAHVRDGSPPQTNIVRVDGHRAVLMPA----------LKNGSISTL 295
            P+    G  + I  VA V  GS  +   V +        P           LK    +T 
Sbjct: 253  PLTEWQGTPVRIMDVAQVAFGSEIRVGAVTMTRRDEAGSPQVLGEVVAGVILKRMGANTK 312

Query: 296  SIIDGIRQMLPRINETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLFLG 355
            + ID I      I + LP  +   +  D S  V ++V +V    ++A +   A++ LFL 
Sbjct: 313  ATIDDINSRTALIQQALPDGVTFEVFYDQSDLVTKAVTTVRDALLLAFMFIVAVLALFLV 372

Query: 356  SWRSTIIIAASIPLAVLSAIALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHL 415
            + R+T ++  SIP+++  A+ +++  G + N+M+LGGLA+A+G+LVD + V +ENI  HL
Sbjct: 373  NVRATALVLLSIPVSIALALMVMSYFGMSANLMSLGGLAVAIGMLVDGSVVMVENIFRHL 432

Query: 416  EQ-------GKP------------------VKTAILDGAAQIVGPAFVSLLCICIVFVPM 450
             Q       G P                  +   IL  A ++  P F + L I +VF P+
Sbjct: 433  TQPEGRVDNGLPTDPGLSEEDAHREGGYGGIAMRILQAAREVCSPIFFATLIIIVVFAPL 492

Query: 451  FLLQGIAGYLFRPMALAVIFAMASSFILSRTLVPTLAMFLLKPHTPEPGAGHHPEDEFIN 510
            F L+G+ G LF+PMA+++I AM S+ +++  +VP LA++L +        G H       
Sbjct: 493  FALEGVEGKLFQPMAVSIILAMLSALMVALVVVPALAVYLFR-------RGVH------- 538

Query: 511  HHEGEQHTQQRNAVLQSVLNFQQGFERHFSNIRDTYHGLLTLALGNRKRFIVGFLACVL- 569
                         + QS L          + I   Y  +L   +   K   VG  A VL 
Sbjct: 539  -------------LRQSPL---------LTPIDKGYRRVLGAVMARPK--TVGITALVLF 574

Query: 570  -ASFLLLPSLGQDFFPATDAGALALHVRLPLGTRIEESAAAFDRIEARIREIIPAEELDT 628
              S  LLP LG +F P  + G + L V L     ++ S     ++EA + E     E+D 
Sbjct: 575  GLSMALLPRLGTEFVPELEEGTINLRVTLAPTASLDTSLMVAPKLEAMLMEF---PEVDY 631

Query: 629  IVDNIGIPLSGIDMAYSSSGTIGPQDGDIQVSLKK----DHAPTADYVKKLREALPHSFP 684
             +  IG P  G D    S       + +I + LK       A +   +++L E     FP
Sbjct: 632  ALSRIGAPELGGDPEPVS-------NIEIYIGLKPIDEWQSAASRAELQRLMEEKLSVFP 684

Query: 685  GSHFAF-LPADISSQILNFGAPAPLDVKISGRSDEENRAYAVELERRLQHVPGIADLRIQ 743
            G  F F  P       L  G  A L +K+ G   +       +L   +  VPG  D+ ++
Sbjct: 685  GLLFTFSQPIATRVDELLSGVKAQLAIKLFGPDLDVLAEKGQQLSELVSKVPGAVDVSLE 744

Query: 744  QSTGYPSLQVNVDRMRANGLGITERDVTNSMVASLAGSSQVAPTFWLNPANGVSYSIVAA 803
            Q +G   L V  DR R    GI+  +V N +V++  G S        N    ++  + A 
Sbjct: 745  QVSGEAQLVVRPDRARLARYGISVDEVMN-LVSTGIGGSDAGQVIDGNARYDINVRLKAD 803

Query: 804  TPQYRLDSLPSLEALPVTGADGQSQILGGVATISRVQSPAVVTHYNIEPTLDLYANVQGR 863
            T      S  ++  L + GA+G    LG VA +    +P  +   +++  + + ANV GR
Sbjct: 804  TRA----SADAIADLLLVGANGARVRLGEVADVVVEMAPPNIRRDDVQRRVVVQANVSGR 859

Query: 864  DLGGVARDVQKVLDDTAALRPKGAVISLHGQIDALHEAFSGLSLGLLGAVVLIYLLIVVN 923
            D+G V +D+  ++ +  A  P G  +S+ GQ +    A + L L +  ++ LI LL+  +
Sbjct: 860  DMGSVVKDIYALVPE--ADLPPGYTVSVGGQYENQQRAQARLMLVVPVSIGLIALLLYFS 917

Query: 924  FQSWSDPFVIITALPAALAGIVWMLFLSGTSLSVPALTGAILCMGVATANSILVVSFCRE 983
            F +     +I+  +P AL G V  L++SGT LSVP+  G I   GVA  N +++V    +
Sbjct: 918  FGALKQVGLIMANVPLALIGGVVALYVSGTYLSVPSSIGFITLFGVAVLNGVVLVDSINQ 977

Query: 984  RLAEHGDALKAAMEAGYTRFRPVCMTALAMIIGMLPLAIS----EEQNAPLGRAVIGGLI 1039
            R A      +A  E    R RPV MTAL   +G++P+ +S     E   PL   +IGGL 
Sbjct: 978  RRAGGEGLYQAVYEGTAARLRPVLMTALTSALGLIPILLSSGVGSEIQQPLAVVIIGGLF 1037

Query: 1040 FATLATLLFVPVVFSLVH 1057
             +T  TLL +P ++  ++
Sbjct: 1038 SSTALTLLVLPTLYMALY 1055



 Score = 92.0 bits (227), Expect = 2e-22
 Identities = 83/320 (25%), Positives = 153/320 (47%), Gaps = 12/320 (3%)

Query: 183  QRQITLDLDPQALAAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTI---LLNNSPKAI 239
            + Q+ +  D   LA  G+S  +V N ++        G    G   Y I   L  ++  + 
Sbjct: 749  EAQLVVRPDRARLARYGISVDEVMNLVSTGIGGSDAGQVIDGNARYDINVRLKADTRASA 808

Query: 240  DELNDLPIKTVDGALITIGQVAHVR-DGSPPQTNIVRVDGHRAVLMPALKNGSISTLSII 298
            D + DL +   +GA + +G+VA V  + +PP  NI R D  R V++ A  +G     S++
Sbjct: 809  DAIADLLLVGANGARVRLGEVADVVVEMAPP--NIRRDDVQRRVVVQANVSGR-DMGSVV 865

Query: 299  DGIRQMLPRINETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLF-LGSW 357
              I  ++P  +  LPP    S+ G      +     +    +   L+  A++L F  G+ 
Sbjct: 866  KDIYALVPEAD--LPPGYTVSVGGQYENQQRAQARLMLVVPVSIGLI--ALLLYFSFGAL 921

Query: 358  RSTIIIAASIPLAVLSAIALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQ 417
            +   +I A++PLA++  +  L VSG  L+V +  G     G+ V +  V +++IN     
Sbjct: 922  KQVGLIMANVPLALIGGVVALYVSGTYLSVPSSIGFITLFGVAVLNGVVLVDSINQRRAG 981

Query: 418  GKPVKTAILDGAAQIVGPAFVSLLCICIVFVPMFLLQGIAGYLFRPMALAVIFAMASSFI 477
            G+ +  A+ +G A  + P  ++ L   +  +P+ L  G+   + +P+A+ +I  + SS  
Sbjct: 982  GEGLYQAVYEGTAARLRPVLMTALTSALGLIPILLSSGVGSEIQQPLAVVIIGGLFSSTA 1041

Query: 478  LSRTLVPTLAMFLLKPHTPE 497
            L+  ++PTL M L + +  E
Sbjct: 1042 LTLLVLPTLYMALYRQNDRE 1061