Pairwise Alignments

Query, 1073 a.a., efflux RND transporter permease subunit from Pseudomonas fluorescens SBW25

Subject, 1035 a.a., heavy metal efflux pump, CzcA family from Marinobacter adhaerens HP15

 Score =  350 bits (897), Expect = e-100
 Identities = 287/1077 (26%), Positives = 491/1077 (45%), Gaps = 85/1077 (7%)

Query: 4    LVKTALQKPYTFIVLAIFICIIGPMAALRTPTDVFPDIGIPVVAVVWQYNGLSPDAMAGR 63
            +V  AL      +V AI + + G  +  + P D FPD    +V V     GLSP  +   
Sbjct: 5    IVNYALNNRLMTLVFAIAVIVAGIFSFQKLPVDAFPDATPTMVQVFTTSPGLSPVDIETL 64

Query: 64   VIYTYERSLSTTVNDIEHIESQSLPGMGIVKIFFQPGVDIRTANAQVTAVSQTVLKQMPP 123
            + Y  E S+   +  +E ++S S+ G+  V I+F+ G DI  A   V        +Q+P 
Sbjct: 65   ISYPVEISMYG-IPKLEKVQSTSIFGLSRVTIYFEDGTDIYFARRLVNERLSEAKRQIPE 123

Query: 124  GITPPLILNYSASTVPILQMAFSSPSLSEARIRDL--VQNNIRLP-LSALPGLAMPTPMG 180
            G+  P +   ++    IL  +  +    +  ++++  +Q+ I  P L  +PG+     +G
Sbjct: 124  GMGEPELGPIASGLGRILMYSLETEDKEQYSLQEIRTIQDWIVKPQLRTVPGVTGVLSIG 183

Query: 181  GKQRQITLDLDPQALAAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTIL----LNNSP 236
            G+ +Q  +++D Q L A+ L+  D+  AL   N+ +       G  EY +     +++  
Sbjct: 184  GEVKQYQVNIDAQELQARNLTVSDIRGALTQNNRNVGASFITRGGEEYIVRGYGWVDSGY 243

Query: 237  KAIDELNDLPIKTVDG-ALITIGQVAHVRDGSPPQTNIVRVDGHRAVLMPALKNGSISTL 295
            + I+++ ++ +   +G + I +  VA V  G   +       G  +V    +K    +T 
Sbjct: 244  EGIEDIQNIIVSKSEGESPIYVKDVAEVGLGPAIRRGAEVSSGEESVGGYVMKLIGTNTS 303

Query: 296  SIIDGIRQMLPRINETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLFLG 355
             +++ +   +  +N++LP  LK       +  V +++G+V +  +  ++L    + LFLG
Sbjct: 304  QVLEDVNAKIDDLNKSLPEGLKIEAYYSQADLVGKAIGTVEKALLEGSVLVLVFLYLFLG 363

Query: 356  SWRSTIIIAASIPLAVLSAIALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHL 415
            + RST+I+ A++PL+VL A   + +SG + N+M+LGGLA+ +G++VD A V IENI  HL
Sbjct: 364  NVRSTLIVVATLPLSVLFAFIAMRMSGLSANLMSLGGLAIGIGMMVDGAVVMIENIFRHL 423

Query: 416  EQGKPVKTAIL----DGAAQIVGPAFVSLLCICIVFVPMFLLQGIAGYLFRPMALAVIFA 471
            E+    K ++L    + A ++  P   ++  I IVF+P+F LQG+ G LF PMA  + FA
Sbjct: 424  EERSDEKVSVLRLVGESAREVARPIVFAIGIIIIVFLPLFTLQGVEGKLFSPMAYTISFA 483

Query: 472  MASSFILSRTLVPTLAMFLLKPHTPEPGAGHHPEDEFINHHEGEQHTQQRNAVLQSVLNF 531
            +  + +L+ TLVP LA    K        G H E + +            N + + V+N 
Sbjct: 484  LIGALLLALTLVPVLASLSFKM------GGQHKEPKLVLF---------LNRLYKPVVN- 527

Query: 532  QQGFERHFSNIRDTYHGLLTLALGNRKRFIVGFLACVLA-SFLLLPSLGQDFFPATDAGA 590
                                  +    + ++G      A S LL P LG +F P    G 
Sbjct: 528  ---------------------TVVKVPKIVMGVAVVAFAGSLLLFPYLGSEFVPTLREGT 566

Query: 591  LALHVRLPLGTRIEESAAAFDRIEARIREIIPAEELDTIVDNIGIPLSGIDMAYSSSGTI 650
              +   LP G  +E +     RI++ + E     E+      IG    G D         
Sbjct: 567  FQIRSTLPPGASLESAIKYGKRIQSVVDEF---PEVTGTYARIGRAEVGGD--------- 614

Query: 651  GPQDGDIQVSLK--------KDHAPTADYVKKLREALPHSFPG-SHFAFLPADISSQILN 701
             P+  ++  +L         ++     D   ++ EAL    PG ++    P  + +  L 
Sbjct: 615  -PEPVNVVATLVNLKPLDQWREDVSYEDLQSRIAEALDERVPGLANNLSQPIQLRTDELL 673

Query: 702  FGAPAPLDVKISGRSDEENRAYAVELERRLQHVPGIADLRIQQSTGYPSLQVNVDRMRAN 761
             G  A L   I G   +E      E+      VPG  D+R QQS G   + +  DR    
Sbjct: 674  SGVQAQLVASIFGDDLDELGRIGREVAALANDVPGATDVRAQQSAGKKQIVIRPDREVLA 733

Query: 762  GLGITERDVTNSMVASLAGSSQVAPTFWLNPANGV-SYSIVAATPQYRLDSLPSLEALPV 820
              GI+  ++ +++   + G S     F     +GV  + I A   +    S+  +  LP+
Sbjct: 734  QFGISIDNLMSTVETGIGGKS-AGLVF-----DGVRRFEIFARLQESYRGSIDEIRKLPL 787

Query: 821  TGADGQSQILGGVATISRVQSPAVVTHYNIEPTLDLYANVQGRDLGGVARDVQKVLDDTA 880
             G  G+   L  VA +     P  ++  N      +  NV+GRD+G V +D++  ++   
Sbjct: 788  RGNSGELIPLSRVADVEMYAGPKKISRSNASRRQYVQMNVRGRDMGSVVQDLRNRIEKQV 847

Query: 881  ALRPKGAVISLHGQIDALHEAFSGLSLGLLGAVVLIYLLIVVNFQSWSDPFVIITALPAA 940
             + P G  +   GQ +    A + L++ +   + LI+LL+   F S     +I   +P A
Sbjct: 848  DM-PPGYFVEFGGQFENQERAMARLAIVVPITLALIFLLLFSAFSSLRYAALIFMNVPFA 906

Query: 941  LAGIVWMLFLSGTSLSVPALTGAILCMGVATANSILVVSFCRERLAEHGDALKAAMEAGY 1000
            + G +  LF++G  LSVPA  G I   GVA  N +++VS+  +   E  + ++A      
Sbjct: 907  VTGGIVALFVTGLYLSVPAAVGFIAVFGVAVLNGVVMVSYINQLRDEGYEVIEAVKLGAQ 966

Query: 1001 TRFRPVCMTALAMIIGMLPL----AISEEQNAPLGRAVIGGLIFATLATLLFVPVVF 1053
             R RPV MTA   I+G++PL     I      PL   V+GGLI +TL TL+ +P V+
Sbjct: 967  RRLRPVLMTASVAILGLIPLLLADGIGSNVQRPLATVVVGGLITSTLLTLVVLPSVY 1023



 Score = 55.8 bits (133), Expect = 2e-11
 Identities = 71/341 (20%), Positives = 142/341 (41%), Gaps = 23/341 (6%)

Query: 730  RLQHVPGIADLRIQQSTGYPSLQVNVDRMRANGLGITERDVTNSMVASLAGSSQVAPTFW 789
            +L+ VPG+  + +         QVN+D        +T  D+  ++  +   +  V  +F 
Sbjct: 169  QLRTVPGVTGV-LSIGGEVKQYQVNIDAQELQARNLTVSDIRGALTQN---NRNVGASFI 224

Query: 790  LNPANGVSYSIVA-ATPQYRLDSLPSLEALPVTGADGQSQILGGVATISRVQ-SPAVVTH 847
                 G  Y +          + +  ++ + V+ ++G+S I   V  ++ V   PA+   
Sbjct: 225  TR--GGEEYIVRGYGWVDSGYEGIEDIQNIIVSKSEGESPIY--VKDVAEVGLGPAIRRG 280

Query: 848  YNI---EPTLDLYA-NVQGRDLGGVARDVQKVLDDTAALRPKGAVI-SLHGQIDALHEAF 902
              +   E ++  Y   + G +   V  DV   +DD     P+G  I + + Q D + +A 
Sbjct: 281  AEVSSGEESVGGYVMKLIGTNTSQVLEDVNAKIDDLNKSLPEGLKIEAYYSQADLVGKAI 340

Query: 903  SGLSLGLLGAVVLIYLLIVVNFQSWSDPFVIITALPAALAGIVWMLFLSGTSLSVPALTG 962
              +   LL   VL+ + + +   +     +++  LP ++      + +SG S ++ +L G
Sbjct: 341  GTVEKALLEGSVLVLVFLYLFLGNVRSTLIVVATLPLSVLFAFIAMRMSGLSANLMSLGG 400

Query: 963  AILCMGVATANSILVVSFCRERLAEHGD----ALKAAMEAGYTRFRPVCMTALAMIIGML 1018
              + +G+    +++++      L E  D     L+   E+     RP+      +II  L
Sbjct: 401  LAIGIGMMVDGAVVMIENIFRHLEERSDEKVSVLRLVGESAREVARPIVFAIGIIIIVFL 460

Query: 1019 PL----AISEEQNAPLGRAVIGGLIFATLATLLFVPVVFSL 1055
            PL     +  +  +P+   +   LI A L  L  VPV+ SL
Sbjct: 461  PLFTLQGVEGKLFSPMAYTISFALIGALLLALTLVPVLASL 501