Pairwise Alignments

Query, 270 a.a., exodeoxyribonuclease III from Pseudomonas fluorescens SBW25

Subject, 263 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  146 bits (369), Expect = 4e-40
 Identities = 94/273 (34%), Positives = 144/273 (52%), Gaps = 17/273 (6%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           MKI ++NING++AR   L   + +  PD+  LQE K  D+ FP  E++ALGYHV  HGQK
Sbjct: 1   MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGYHVETHGQK 60

Query: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDHP 120
           G  GVALLS+     +++G   D  D Q RFI G F+  +G  + +   Y P G   +  
Sbjct: 61  GFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFS-VNGGALRVCCLYLPNGNPVE-T 118

Query: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPE--DC-DIGIGADNAKRWLKTGK 177
            K+P K  +   L    E +   ++ L++ GD N+ PE  DC D+ +  ++A        
Sbjct: 119 EKYPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCWDVKVWRNDA-------- 170

Query: 178 CSFLPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMAS 237
             +LPE R    RL+N G  D+ R    D    +S++DY++  +  +   G+RID +M S
Sbjct: 171 -LYLPETRAAFRRLRNLGFTDAVR-ATSDEAPLYSFWDYQAGCW--QKNFGIRIDHLMLS 226

Query: 238 NGLLPRVKDAGVDYDLRGLEKPSDHAPIWLELS 270
                ++    ++  +R  EKPSDH P+  E +
Sbjct: 227 PEAADKLVSTSIEKHVRAWEKPSDHVPVTAEFA 259