Pairwise Alignments

Query, 270 a.a., exodeoxyribonuclease III from Pseudomonas fluorescens SBW25

Subject, 269 a.a., exonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  369 bits (948), Expect = e-107
 Identities = 169/266 (63%), Positives = 214/266 (80%), Gaps = 2/266 (0%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           MKIVSFNINGLRAR HQL ALI+ H PD+IGLQETKVHD+ FPLAEV+A+GY V+YHG K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDHP 120
            HYGVA+LS+ P + + KGF +D+++AQRR I GTF   +G+ +T++NGYFPQGE+  H 
Sbjct: 61  AHYGVAMLSKLPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISHE 120

Query: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180
           TK+PAK++FY+DL   L+   S D+ + ++GD+NISP D DIGIG  NAKRWLKTGKCSF
Sbjct: 121 TKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSF 180

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGL 240
            PEEREW+  L +WGLVD+FR L+P   +R+SWFDYRS+GF+D   RGLRIDVI+A+  L
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDD--NRGLRIDVILATPSL 238

Query: 241 LPRVKDAGVDYDLRGLEKPSDHAPIW 266
             R+ ++ VDYDLRG++KPSDHAPIW
Sbjct: 239 AERLTESDVDYDLRGIDKPSDHAPIW 264